KRTAP4-3

 

Full name: keratin associated protein 4-3 Alias Symbol: KAP4.3
Type: protein-coding gene Cytoband: 17q21.2
Entrez ID: 85290 HGNC ID: HGNC:18908 Ensembl Gene: ENSG00000196156 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of KRTAP4-3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 KRTAP4-3 85290 234678_at -0.0352 0.8857
GSE26886 KRTAP4-3 85290 234678_at -0.0248 0.8451
GSE45670 KRTAP4-3 85290 234678_at 0.0584 0.3259
GSE53622 KRTAP4-3 85290 152450 -0.0179 0.8549
GSE53624 KRTAP4-3 85290 152450 -0.2968 0.0006
GSE63941 KRTAP4-3 85290 234678_at -0.2538 0.0695
GSE77861 KRTAP4-3 85290 234678_at -0.0721 0.3703
GSE97050 KRTAP4-3 85290 A_33_P3312743 -0.1982 0.3196

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by KRTAP4-3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of KRTAP4-3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 KRTAP4-3 85290 7 1 22
GSE20123 KRTAP4-3 85290 7 1 22
GSE43470 KRTAP4-3 85290 1 2 40
GSE46452 KRTAP4-3 85290 34 0 25
GSE47630 KRTAP4-3 85290 8 1 31
GSE54993 KRTAP4-3 85290 3 4 63
GSE54994 KRTAP4-3 85290 8 5 40
GSE60625 KRTAP4-3 85290 4 0 7
GSE74703 KRTAP4-3 85290 1 1 34
GSE74704 KRTAP4-3 85290 4 1 15

Total number of gains: 77; Total number of losses: 16; Total Number of normals: 299.  


 

Somatic mutations of KRTAP4-3:

 

Generating mutation plots.

 

Highly correlated genes for KRTAP4-3:

 

Showing top 20/52 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
KRTAP4-3CISH0.787409303
KRTAP4-3KRTAP9-60.717725303
KRTAP4-3ACHE0.677337303
KRTAP4-3KRTAP5-80.670229403
KRTAP4-3HLA-DQB20.668669303
KRTAP4-3TRIM30.656266303
KRTAP4-3PDCD40.633552403
KRTAP4-3DNAH110.618107403
KRTAP4-3CCDC400.611425403
KRTAP4-3TMEM38A0.605901403
KRTAP4-3GH20.604465403
KRTAP4-3F100.604214404
KRTAP4-3OR4D100.603989303
KRTAP4-3STBD10.60264303
KRTAP4-3KIAA0895L0.599137403
KRTAP4-3KCNQ30.594942503
KRTAP4-3ARHGAP26-AS10.59483303
KRTAP4-3OR3A10.590279404
KRTAP4-3C9orf470.588979303
KRTAP4-3C9orf500.588373403

For details and further investigation, click here