| Full name: chromosome 9 open reading frame 47 | Alias Symbol: FLJ37523|bA791O21.3 | ||
| Type: protein-coding gene | Cytoband: 9q22.1 | ||
| Entrez ID: 286223 | HGNC ID: HGNC:23669 | Ensembl Gene: ENSG00000186354 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of C9orf47:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | C9orf47 | 286223 | 1564274_at | -0.8781 | 0.2616 | |
| GSE26886 | C9orf47 | 286223 | 1564274_at | -0.2983 | 0.0080 | |
| GSE45670 | C9orf47 | 286223 | 1564274_at | -0.1026 | 0.3871 | |
| GSE63941 | C9orf47 | 286223 | 1564274_at | -0.3341 | 0.0964 | |
| GSE77861 | C9orf47 | 286223 | 1564274_at | 0.0312 | 0.8251 | |
| GSE97050 | C9orf47 | 286223 | A_33_P3248638 | -0.8057 | 0.1939 | |
| SRP133303 | C9orf47 | 286223 | RNAseq | -0.1506 | 0.7777 | |
| SRP159526 | C9orf47 | 286223 | RNAseq | -0.6543 | 0.3670 | |
| TCGA | C9orf47 | 286223 | RNAseq | -1.1530 | 0.0035 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by C9orf47 expression:
 |
| TCGA |
Note: Click image to view full size file.
Copy number change of C9orf47:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | C9orf47 | 286223 | 5 | 10 | 15 | |
| GSE20123 | C9orf47 | 286223 | 5 | 10 | 15 | |
| GSE43470 | C9orf47 | 286223 | 6 | 3 | 34 | |
| GSE46452 | C9orf47 | 286223 | 6 | 14 | 39 | |
| GSE47630 | C9orf47 | 286223 | 1 | 18 | 21 | |
| GSE54993 | C9orf47 | 286223 | 4 | 2 | 64 | |
| GSE54994 | C9orf47 | 286223 | 6 | 11 | 36 | |
| GSE60625 | C9orf47 | 286223 | 0 | 0 | 11 | |
| GSE74703 | C9orf47 | 286223 | 5 | 3 | 28 | |
| GSE74704 | C9orf47 | 286223 | 3 | 7 | 10 | |
| TCGA | C9orf47 | 286223 | 21 | 24 | 51 |
Total number of gains: 62; Total number of losses: 102; Total Number of normals: 324.
Somatic mutations of C9orf47:
Generating mutation plots.
Highly correlated genes for C9orf47:
Showing top 20/199 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| C9orf47 | CACNA2D2 | 0.860984 | 3 | 0 | 3 |
| C9orf47 | FN3K | 0.834173 | 3 | 0 | 3 |
| C9orf47 | WSCD2 | 0.82861 | 3 | 0 | 3 |
| C9orf47 | POU6F1 | 0.803349 | 3 | 0 | 3 |
| C9orf47 | RNASE4 | 0.802008 | 3 | 0 | 3 |
| C9orf47 | FLNA | 0.799194 | 3 | 0 | 3 |
| C9orf47 | CTNNA3 | 0.786828 | 3 | 0 | 3 |
| C9orf47 | EIF4E3 | 0.781017 | 3 | 0 | 3 |
| C9orf47 | MUC19 | 0.780751 | 3 | 0 | 3 |
| C9orf47 | PDLIM7 | 0.775972 | 3 | 0 | 3 |
| C9orf47 | RRAS | 0.772878 | 3 | 0 | 3 |
| C9orf47 | HAND2 | 0.769092 | 3 | 0 | 3 |
| C9orf47 | NR4A1 | 0.767292 | 3 | 0 | 3 |
| C9orf47 | JUN | 0.767085 | 3 | 0 | 3 |
| C9orf47 | SMTN | 0.759785 | 3 | 0 | 3 |
| C9orf47 | PRIMA1 | 0.759343 | 4 | 0 | 4 |
| C9orf47 | ANG | 0.755348 | 3 | 0 | 3 |
| C9orf47 | SOX17 | 0.748866 | 3 | 0 | 3 |
| C9orf47 | HSPB7 | 0.744642 | 3 | 0 | 3 |
| C9orf47 | ADD1 | 0.741544 | 3 | 0 | 3 |
For details and further investigation, click here
