LANCL2

 

Full name: LanC like 2 Alias Symbol: TASP
Type: protein-coding gene Cytoband: 7p11.2
Entrez ID: 55915 HGNC ID: HGNC:6509 Ensembl Gene: ENSG00000132434 OMIM ID: 612919
Drug and gene relationship at DGIdb

 

Expression of LANCL2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 LANCL2 55915 218219_s_at 0.4892 0.2499
GSE20347 LANCL2 55915 218219_s_at 0.6086 0.0467
GSE23400 LANCL2 55915 218219_s_at 0.4445 0.0015
GSE26886 LANCL2 55915 218219_s_at 0.5439 0.0029
GSE29001 LANCL2 55915 218219_s_at 0.8120 0.0276
GSE38129 LANCL2 55915 218219_s_at 0.7897 0.0003
GSE45670 LANCL2 55915 218219_s_at 0.4958 0.0055
GSE53622 LANCL2 55915 166350 0.1753 0.1522
GSE53624 LANCL2 55915 166350 0.1868 0.1439
GSE63941 LANCL2 55915 218219_s_at 1.0137 0.2302
GSE77861 LANCL2 55915 218219_s_at 0.1827 0.5467
GSE97050 LANCL2 55915 A_24_P286569 -0.0862 0.8245
SRP007169 LANCL2 55915 RNAseq -0.3008 0.4862
SRP008496 LANCL2 55915 RNAseq 0.3164 0.4124
SRP064894 LANCL2 55915 RNAseq 0.5311 0.0071
SRP133303 LANCL2 55915 RNAseq 0.1834 0.3340
SRP159526 LANCL2 55915 RNAseq 0.7045 0.0085
SRP193095 LANCL2 55915 RNAseq 0.2226 0.1935
SRP219564 LANCL2 55915 RNAseq 0.2522 0.3659
TCGA LANCL2 55915 RNAseq 0.1067 0.2938

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by LANCL2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of LANCL2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 LANCL2 55915 13 0 17
GSE20123 LANCL2 55915 11 0 19
GSE43470 LANCL2 55915 6 0 37
GSE46452 LANCL2 55915 13 0 46
GSE47630 LANCL2 55915 10 1 29
GSE54993 LANCL2 55915 0 10 60
GSE54994 LANCL2 55915 18 1 34
GSE60625 LANCL2 55915 0 0 11
GSE74703 LANCL2 55915 6 0 30
GSE74704 LANCL2 55915 6 0 14
TCGA LANCL2 55915 57 5 34

Total number of gains: 140; Total number of losses: 17; Total Number of normals: 331.  

 

Somatic mutations of LANCL2:

 

Generating mutation plots.

 

Highly correlated genes for LANCL2:

 

Showing top 20/767 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
LANCL2FDPS0.783309404
LANCL2ZFP900.768403303
LANCL2TNFAIP10.754322303
LANCL2MTPAP0.744316303
LANCL2CSNK2A20.742557404
LANCL2MCOLN30.740454404
LANCL2SMAD10.740395303
LANCL2EXOC60.72935303
LANCL2KIAA15860.723145303
LANCL2TSPAN170.719956404
LANCL2CATSPERB0.718716303
LANCL2TMEM2050.714776303
LANCL2NQO20.714005303
LANCL2SLC36A40.713768303
LANCL2HAVCR20.71364303
LANCL2CIAO10.710575403
LANCL2LARS20.709912403
LANCL2CLIP20.707064303
LANCL2CHCHD40.701356303
LANCL2AHCY0.701123505

For details and further investigation, click here