| Full name: tetraspanin 17 | Alias Symbol: FBX23 | ||
| Type: protein-coding gene | Cytoband: 5q35.2 | ||
| Entrez ID: 26262 | HGNC ID: HGNC:13594 | Ensembl Gene: ENSG00000048140 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of TSPAN17:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TSPAN17 | 26262 | 225235_at | 0.4780 | 0.1517 | |
| GSE26886 | TSPAN17 | 26262 | 225235_at | -0.0298 | 0.9109 | |
| GSE45670 | TSPAN17 | 26262 | 225235_at | 0.3533 | 0.0109 | |
| GSE53622 | TSPAN17 | 26262 | 14424 | 0.3077 | 0.0005 | |
| GSE53624 | TSPAN17 | 26262 | 14424 | 0.3212 | 0.0000 | |
| GSE63941 | TSPAN17 | 26262 | 225235_at | -0.1529 | 0.6816 | |
| GSE77861 | TSPAN17 | 26262 | 225235_at | 0.0876 | 0.6964 | |
| GSE97050 | TSPAN17 | 26262 | A_33_P3257784 | 0.3314 | 0.3404 | |
| SRP007169 | TSPAN17 | 26262 | RNAseq | -1.5938 | 0.0002 | |
| SRP008496 | TSPAN17 | 26262 | RNAseq | -1.1215 | 0.0002 | |
| SRP064894 | TSPAN17 | 26262 | RNAseq | 0.3724 | 0.0789 | |
| SRP133303 | TSPAN17 | 26262 | RNAseq | 0.6177 | 0.0063 | |
| SRP159526 | TSPAN17 | 26262 | RNAseq | 0.4409 | 0.1737 | |
| SRP193095 | TSPAN17 | 26262 | RNAseq | 0.1569 | 0.2048 | |
| SRP219564 | TSPAN17 | 26262 | RNAseq | 0.2954 | 0.4399 | |
| TCGA | TSPAN17 | 26262 | RNAseq | 0.0919 | 0.1250 |
Upregulated datasets: 0; Downregulated datasets: 2.
Survival by TSPAN17 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of TSPAN17:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TSPAN17 | 26262 | 2 | 13 | 15 | |
| GSE20123 | TSPAN17 | 26262 | 2 | 13 | 15 | |
| GSE43470 | TSPAN17 | 26262 | 1 | 11 | 31 | |
| GSE46452 | TSPAN17 | 26262 | 0 | 27 | 32 | |
| GSE47630 | TSPAN17 | 26262 | 0 | 20 | 20 | |
| GSE54993 | TSPAN17 | 26262 | 10 | 2 | 58 | |
| GSE54994 | TSPAN17 | 26262 | 2 | 17 | 34 | |
| GSE60625 | TSPAN17 | 26262 | 1 | 0 | 10 | |
| GSE74703 | TSPAN17 | 26262 | 1 | 7 | 28 | |
| GSE74704 | TSPAN17 | 26262 | 1 | 6 | 13 | |
| TCGA | TSPAN17 | 26262 | 7 | 35 | 54 |
Total number of gains: 27; Total number of losses: 151; Total Number of normals: 310.
Somatic mutations of TSPAN17:
Generating mutation plots.
Highly correlated genes for TSPAN17:
Showing top 20/353 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TSPAN17 | RNF187 | 0.859893 | 3 | 0 | 3 |
| TSPAN17 | RHBDF2 | 0.77219 | 3 | 0 | 3 |
| TSPAN17 | TTC30B | 0.762176 | 3 | 0 | 3 |
| TSPAN17 | TBC1D22A | 0.761506 | 3 | 0 | 3 |
| TSPAN17 | NCAPG | 0.753665 | 3 | 0 | 3 |
| TSPAN17 | CCT6A | 0.752794 | 3 | 0 | 3 |
| TSPAN17 | GART | 0.748423 | 4 | 0 | 4 |
| TSPAN17 | SLC25A13 | 0.745087 | 3 | 0 | 3 |
| TSPAN17 | FANCD2 | 0.744227 | 3 | 0 | 3 |
| TSPAN17 | ACTR3 | 0.744187 | 4 | 0 | 4 |
| TSPAN17 | TMEM160 | 0.74406 | 3 | 0 | 3 |
| TSPAN17 | UBR4 | 0.743645 | 3 | 0 | 3 |
| TSPAN17 | GPR160 | 0.728747 | 3 | 0 | 3 |
| TSPAN17 | GANAB | 0.72667 | 3 | 0 | 3 |
| TSPAN17 | WIPI1 | 0.725146 | 4 | 0 | 4 |
| TSPAN17 | LARS2 | 0.725046 | 3 | 0 | 3 |
| TSPAN17 | ITPR3 | 0.722031 | 4 | 0 | 3 |
| TSPAN17 | LANCL2 | 0.719956 | 4 | 0 | 4 |
| TSPAN17 | SCARB1 | 0.714506 | 3 | 0 | 3 |
| TSPAN17 | MBD4 | 0.71404 | 3 | 0 | 3 |
For details and further investigation, click here
