| Full name: long intergenic non-protein coding RNA 311 | Alias Symbol: MGC22001 | ||
| Type: non-coding RNA | Cytoband: 16q24.1 | ||
| Entrez ID: 197196 | HGNC ID: HGNC:28312 | Ensembl Gene: ENSG00000179219 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00311:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00311 | 197196 | 1552856_at | 0.0634 | 0.8749 | |
| GSE26886 | LINC00311 | 197196 | 1552856_at | 0.1837 | 0.1221 | |
| GSE45670 | LINC00311 | 197196 | 1552856_at | 0.0631 | 0.4674 | |
| GSE53622 | LINC00311 | 197196 | 25600 | 0.3979 | 0.0003 | |
| GSE53624 | LINC00311 | 197196 | 25600 | 0.4241 | 0.0000 | |
| GSE63941 | LINC00311 | 197196 | 1552856_at | 0.2024 | 0.1171 | |
| GSE77861 | LINC00311 | 197196 | 1552856_at | -0.1138 | 0.3415 | |
| SRP133303 | LINC00311 | 197196 | RNAseq | 0.2606 | 0.1687 | |
| SRP193095 | LINC00311 | 197196 | RNAseq | 0.3754 | 0.0583 | |
| SRP219564 | LINC00311 | 197196 | RNAseq | 0.8416 | 0.0512 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC00311 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00311:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00311 | 197196 | 4 | 4 | 22 | |
| GSE20123 | LINC00311 | 197196 | 4 | 4 | 22 | |
| GSE43470 | LINC00311 | 197196 | 2 | 10 | 31 | |
| GSE46452 | LINC00311 | 197196 | 37 | 2 | 20 | |
| GSE47630 | LINC00311 | 197196 | 11 | 9 | 20 | |
| GSE54993 | LINC00311 | 197196 | 3 | 4 | 63 | |
| GSE54994 | LINC00311 | 197196 | 8 | 10 | 35 | |
| GSE60625 | LINC00311 | 197196 | 4 | 0 | 7 | |
| GSE74703 | LINC00311 | 197196 | 2 | 7 | 27 | |
| GSE74704 | LINC00311 | 197196 | 3 | 2 | 15 | |
| TCGA | LINC00311 | 197196 | 26 | 16 | 54 |
Total number of gains: 104; Total number of losses: 68; Total Number of normals: 316.
Somatic mutations of LINC00311:
Generating mutation plots.
Highly correlated genes for LINC00311:
Showing top 20/104 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00311 | DEFA6 | 0.712292 | 3 | 0 | 3 |
| LINC00311 | PRDM8 | 0.707718 | 3 | 0 | 3 |
| LINC00311 | REG3G | 0.67117 | 3 | 0 | 3 |
| LINC00311 | BCDIN3D-AS1 | 0.667184 | 3 | 0 | 3 |
| LINC00311 | HRH2 | 0.665121 | 3 | 0 | 3 |
| LINC00311 | APC2 | 0.662717 | 4 | 0 | 3 |
| LINC00311 | FOXB1 | 0.662225 | 3 | 0 | 3 |
| LINC00311 | PSD | 0.657206 | 3 | 0 | 3 |
| LINC00311 | AMHR2 | 0.651492 | 4 | 0 | 4 |
| LINC00311 | AFMID | 0.64784 | 3 | 0 | 3 |
| LINC00311 | BTBD17 | 0.645699 | 3 | 0 | 3 |
| LINC00311 | TMEM151B | 0.643313 | 3 | 0 | 3 |
| LINC00311 | HAO1 | 0.642281 | 3 | 0 | 3 |
| LINC00311 | HMCN2 | 0.641898 | 3 | 0 | 3 |
| LINC00311 | TTC9B | 0.634497 | 3 | 0 | 3 |
| LINC00311 | TENM1 | 0.63271 | 3 | 0 | 3 |
| LINC00311 | IQSEC2 | 0.630807 | 3 | 0 | 3 |
| LINC00311 | DMRTA1 | 0.63054 | 3 | 0 | 3 |
| LINC00311 | KCTD17 | 0.630377 | 3 | 0 | 3 |
| LINC00311 | PTCH2 | 0.628332 | 3 | 0 | 3 |
For details and further investigation, click here
