| Full name: long intergenic non-protein coding RNA 470 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 18p11.32 | ||
| Entrez ID: 56651 | HGNC ID: HGNC:1225 | Ensembl Gene: ENSG00000132204 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00470:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00470 | 56651 | 234712_at | -0.0866 | 0.7511 | |
| GSE26886 | LINC00470 | 56651 | 234712_at | -0.2365 | 0.2320 | |
| GSE45670 | LINC00470 | 56651 | 234712_at | 0.0159 | 0.9087 | |
| GSE53622 | LINC00470 | 56651 | 109857 | 0.4614 | 0.0001 | |
| GSE53624 | LINC00470 | 56651 | 109857 | 0.7098 | 0.0000 | |
| GSE63941 | LINC00470 | 56651 | 234712_at | 0.0187 | 0.9425 | |
| GSE77861 | LINC00470 | 56651 | 234712_at | -0.2548 | 0.0281 | |
| SRP133303 | LINC00470 | 56651 | RNAseq | 1.2831 | 0.0085 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by LINC00470 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00470:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00470 | 56651 | 6 | 3 | 21 | |
| GSE20123 | LINC00470 | 56651 | 6 | 3 | 21 | |
| GSE43470 | LINC00470 | 56651 | 2 | 5 | 36 | |
| GSE46452 | LINC00470 | 56651 | 4 | 20 | 35 | |
| GSE47630 | LINC00470 | 56651 | 7 | 18 | 15 | |
| GSE54993 | LINC00470 | 56651 | 6 | 3 | 61 | |
| GSE54994 | LINC00470 | 56651 | 12 | 8 | 33 | |
| GSE60625 | LINC00470 | 56651 | 0 | 4 | 7 | |
| GSE74703 | LINC00470 | 56651 | 2 | 3 | 31 | |
| GSE74704 | LINC00470 | 56651 | 4 | 2 | 14 | |
| TCGA | LINC00470 | 56651 | 37 | 15 | 44 |
Total number of gains: 86; Total number of losses: 84; Total Number of normals: 318.
Somatic mutations of LINC00470:
Generating mutation plots.
Highly correlated genes for LINC00470:
Showing top 20/165 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00470 | TMEM114 | 0.698805 | 3 | 0 | 3 |
| LINC00470 | CIB3 | 0.696121 | 3 | 0 | 3 |
| LINC00470 | E2F4 | 0.675361 | 3 | 0 | 3 |
| LINC00470 | OR2H1 | 0.654084 | 4 | 0 | 3 |
| LINC00470 | DEFB121 | 0.652153 | 4 | 0 | 4 |
| LINC00470 | VGLL2 | 0.650883 | 4 | 0 | 4 |
| LINC00470 | BFSP2-AS1 | 0.648358 | 3 | 0 | 3 |
| LINC00470 | CLCN4 | 0.644847 | 3 | 0 | 3 |
| LINC00470 | LARGE-AS1 | 0.642686 | 3 | 0 | 3 |
| LINC00470 | KLHL10 | 0.639837 | 3 | 0 | 3 |
| LINC00470 | IFNL2 | 0.636789 | 3 | 0 | 3 |
| LINC00470 | POU6F1 | 0.632855 | 3 | 0 | 3 |
| LINC00470 | MVK | 0.632721 | 3 | 0 | 3 |
| LINC00470 | PRAMEF11 | 0.632241 | 3 | 0 | 3 |
| LINC00470 | ADH6 | 0.631225 | 3 | 0 | 3 |
| LINC00470 | HTR1E | 0.627874 | 3 | 0 | 3 |
| LINC00470 | HGFAC | 0.626068 | 4 | 0 | 4 |
| LINC00470 | SPRN | 0.622376 | 3 | 0 | 3 |
| LINC00470 | PHF7 | 0.62201 | 3 | 0 | 3 |
| LINC00470 | TRIM40 | 0.61994 | 4 | 0 | 3 |
For details and further investigation, click here
