| Full name: VPS9D1 antisense RNA 1 | Alias Symbol: MYU | ||
| Type: non-coding RNA | Cytoband: 16q24.3 | ||
| Entrez ID: 100128881 | HGNC ID: HGNC:48915 | Ensembl Gene: ENSG00000261373 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of VPS9D1-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | VPS9D1-AS1 | 100128881 | 1558728_at | 0.1644 | 0.5256 | |
| GSE26886 | VPS9D1-AS1 | 100128881 | 1558728_at | 0.1991 | 0.2517 | |
| GSE45670 | VPS9D1-AS1 | 100128881 | 1558728_at | 0.0234 | 0.8240 | |
| GSE53622 | VPS9D1-AS1 | 100128881 | 80739 | 0.1860 | 0.0291 | |
| GSE53624 | VPS9D1-AS1 | 100128881 | 80739 | 0.3527 | 0.0002 | |
| GSE63941 | VPS9D1-AS1 | 100128881 | 1558728_at | 0.3648 | 0.0601 | |
| GSE77861 | VPS9D1-AS1 | 100128881 | 1558728_at | 0.0702 | 0.6783 | |
| SRP064894 | VPS9D1-AS1 | 100128881 | RNAseq | 0.1131 | 0.7201 | |
| SRP133303 | VPS9D1-AS1 | 100128881 | RNAseq | 0.8838 | 0.0401 | |
| SRP159526 | VPS9D1-AS1 | 100128881 | RNAseq | 1.4701 | 0.0116 | |
| SRP193095 | VPS9D1-AS1 | 100128881 | RNAseq | 1.0392 | 0.0000 | |
| SRP219564 | VPS9D1-AS1 | 100128881 | RNAseq | -0.4127 | 0.4968 |
Upregulated datasets: 2; Downregulated datasets: 0.
Survival by VPS9D1-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of VPS9D1-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | VPS9D1-AS1 | 100128881 | 4 | 3 | 23 | |
| GSE20123 | VPS9D1-AS1 | 100128881 | 4 | 3 | 23 | |
| GSE43470 | VPS9D1-AS1 | 100128881 | 1 | 13 | 29 | |
| GSE46452 | VPS9D1-AS1 | 100128881 | 38 | 1 | 20 | |
| GSE47630 | VPS9D1-AS1 | 100128881 | 11 | 9 | 20 | |
| GSE54993 | VPS9D1-AS1 | 100128881 | 3 | 4 | 63 | |
| GSE54994 | VPS9D1-AS1 | 100128881 | 9 | 11 | 33 | |
| GSE60625 | VPS9D1-AS1 | 100128881 | 4 | 0 | 7 | |
| GSE74703 | VPS9D1-AS1 | 100128881 | 1 | 9 | 26 | |
| GSE74704 | VPS9D1-AS1 | 100128881 | 3 | 1 | 16 |
Total number of gains: 78; Total number of losses: 54; Total Number of normals: 260.
Somatic mutations of VPS9D1-AS1:
Generating mutation plots.
Highly correlated genes for VPS9D1-AS1:
Showing top 20/67 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| VPS9D1-AS1 | PIP5K1A | 0.736467 | 3 | 0 | 3 |
| VPS9D1-AS1 | GPR173 | 0.700038 | 3 | 0 | 3 |
| VPS9D1-AS1 | GLP1R | 0.668285 | 5 | 0 | 5 |
| VPS9D1-AS1 | HPX | 0.66584 | 4 | 0 | 4 |
| VPS9D1-AS1 | IL17C | 0.646403 | 4 | 0 | 3 |
| VPS9D1-AS1 | FOSL1 | 0.645257 | 3 | 0 | 3 |
| VPS9D1-AS1 | SOX1 | 0.628883 | 5 | 0 | 4 |
| VPS9D1-AS1 | TTBK1 | 0.620694 | 3 | 0 | 3 |
| VPS9D1-AS1 | FAM86C1 | 0.617197 | 3 | 0 | 3 |
| VPS9D1-AS1 | PIGQ | 0.614147 | 3 | 0 | 3 |
| VPS9D1-AS1 | LINC00520 | 0.614095 | 4 | 0 | 3 |
| VPS9D1-AS1 | HYPK | 0.613523 | 4 | 0 | 3 |
| VPS9D1-AS1 | DLX6-AS1 | 0.610039 | 3 | 0 | 3 |
| VPS9D1-AS1 | MYL10 | 0.606328 | 4 | 0 | 4 |
| VPS9D1-AS1 | DSCAM | 0.599723 | 4 | 0 | 3 |
| VPS9D1-AS1 | DLGAP1-AS2 | 0.597004 | 3 | 0 | 3 |
| VPS9D1-AS1 | INO80B | 0.596853 | 5 | 0 | 3 |
| VPS9D1-AS1 | ATXN2L | 0.595713 | 6 | 0 | 5 |
| VPS9D1-AS1 | DLL4 | 0.593428 | 4 | 0 | 3 |
| VPS9D1-AS1 | LINC00491 | 0.593396 | 4 | 0 | 3 |
For details and further investigation, click here
