| Full name: long intergenic non-protein coding RNA 1115 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 2p25.3 | ||
| Entrez ID: 339822 | HGNC ID: HGNC:49258 | Ensembl Gene: ENSG00000237667 | OMIM ID: |
Expression of LINC01115:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC01115 | 339822 | 1562844_at | 0.0214 | 0.9537 | |
| GSE26886 | LINC01115 | 339822 | 1562844_at | 0.0823 | 0.6001 | |
| GSE45670 | LINC01115 | 339822 | 1562844_at | 0.1324 | 0.2112 | |
| GSE53622 | LINC01115 | 339822 | 7696 | 0.2236 | 0.0001 | |
| GSE53624 | LINC01115 | 339822 | 7696 | 0.1236 | 0.3664 | |
| GSE63941 | LINC01115 | 339822 | 1562844_at | 0.2426 | 0.0996 | |
| GSE77861 | LINC01115 | 339822 | 1562844_at | -0.0809 | 0.5939 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC01115 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC01115:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC01115 | 339822 | 8 | 2 | 20 | |
| GSE20123 | LINC01115 | 339822 | 8 | 2 | 20 | |
| GSE43470 | LINC01115 | 339822 | 3 | 1 | 39 | |
| GSE46452 | LINC01115 | 339822 | 3 | 4 | 52 | |
| GSE47630 | LINC01115 | 339822 | 7 | 0 | 33 | |
| GSE54993 | LINC01115 | 339822 | 1 | 7 | 62 | |
| GSE54994 | LINC01115 | 339822 | 13 | 0 | 40 | |
| GSE60625 | LINC01115 | 339822 | 0 | 3 | 8 | |
| GSE74703 | LINC01115 | 339822 | 3 | 0 | 33 | |
| GSE74704 | LINC01115 | 339822 | 8 | 1 | 11 |
Total number of gains: 54; Total number of losses: 20; Total Number of normals: 318.
Somatic mutations of LINC01115:
Generating mutation plots.
Highly correlated genes for LINC01115:
Showing top 20/102 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC01115 | KCNIP2-AS1 | 0.690735 | 3 | 0 | 3 |
| LINC01115 | BMP15 | 0.687213 | 3 | 0 | 3 |
| LINC01115 | VWA3A | 0.678052 | 3 | 0 | 3 |
| LINC01115 | GSX1 | 0.669696 | 4 | 0 | 4 |
| LINC01115 | NCR1 | 0.633045 | 3 | 0 | 3 |
| LINC01115 | C3orf56 | 0.632543 | 3 | 0 | 3 |
| LINC01115 | PURB | 0.629439 | 3 | 0 | 3 |
| LINC01115 | CPN2 | 0.628578 | 3 | 0 | 3 |
| LINC01115 | CRYBB1 | 0.618121 | 4 | 0 | 3 |
| LINC01115 | APOBEC2 | 0.61481 | 3 | 0 | 3 |
| LINC01115 | LINC00491 | 0.611831 | 4 | 0 | 3 |
| LINC01115 | RSPH3 | 0.610394 | 3 | 0 | 3 |
| LINC01115 | C12orf40 | 0.607569 | 3 | 0 | 3 |
| LINC01115 | CASC6 | 0.606184 | 3 | 0 | 3 |
| LINC01115 | SLC25A35 | 0.604685 | 3 | 0 | 3 |
| LINC01115 | GPR52 | 0.604398 | 4 | 0 | 3 |
| LINC01115 | GNAO1 | 0.60336 | 3 | 0 | 3 |
| LINC01115 | KRBA1 | 0.602282 | 4 | 0 | 3 |
| LINC01115 | DSCAM | 0.60156 | 4 | 0 | 4 |
| LINC01115 | SEMA6C | 0.601457 | 4 | 0 | 3 |
For details and further investigation, click here
