| Full name: rhodopsin | Alias Symbol: OPN2|CSNBAD1 | ||
| Type: protein-coding gene | Cytoband: 3q22.1 | ||
| Entrez ID: 6010 | HGNC ID: HGNC:10012 | Ensembl Gene: ENSG00000163914 | OMIM ID: 180380 |
| Drug and gene relationship at DGIdb | |||
Expression of RHO:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RHO | 6010 | 206455_s_at | 0.0095 | 0.9771 | |
| GSE20347 | RHO | 6010 | 206455_s_at | 0.0409 | 0.6109 | |
| GSE23400 | RHO | 6010 | 206455_s_at | -0.0987 | 0.0024 | |
| GSE26886 | RHO | 6010 | 206455_s_at | -0.0562 | 0.6770 | |
| GSE29001 | RHO | 6010 | 206454_s_at | -0.1877 | 0.1614 | |
| GSE38129 | RHO | 6010 | 206455_s_at | -0.0219 | 0.8410 | |
| GSE45670 | RHO | 6010 | 206455_s_at | -0.0361 | 0.7077 | |
| GSE63941 | RHO | 6010 | 206455_s_at | 0.4631 | 0.0008 | |
| GSE77861 | RHO | 6010 | 206455_s_at | 0.0215 | 0.8414 | |
| GSE97050 | RHO | 6010 | A_23_P407472 | 0.1428 | 0.5400 | |
| TCGA | RHO | 6010 | RNAseq | 1.0484 | 0.4434 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by RHO expression:
 |
| TCGA |
Note: Click image to view full size file.
Copy number change of RHO:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RHO | 6010 | 17 | 0 | 13 | |
| GSE20123 | RHO | 6010 | 17 | 0 | 13 | |
| GSE43470 | RHO | 6010 | 19 | 0 | 24 | |
| GSE46452 | RHO | 6010 | 14 | 5 | 40 | |
| GSE47630 | RHO | 6010 | 18 | 3 | 19 | |
| GSE54993 | RHO | 6010 | 2 | 8 | 60 | |
| GSE54994 | RHO | 6010 | 32 | 3 | 18 | |
| GSE60625 | RHO | 6010 | 0 | 6 | 5 | |
| GSE74703 | RHO | 6010 | 17 | 0 | 19 | |
| GSE74704 | RHO | 6010 | 13 | 0 | 7 | |
| TCGA | RHO | 6010 | 58 | 5 | 33 |
Total number of gains: 207; Total number of losses: 30; Total Number of normals: 251.
Somatic mutations of RHO:
Generating mutation plots.
Highly correlated genes for RHO:
Showing top 20/929 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RHO | IKBKG | 0.755244 | 3 | 0 | 3 |
| RHO | KHDRBS2 | 0.699836 | 5 | 0 | 5 |
| RHO | TAAR2 | 0.6986 | 3 | 0 | 3 |
| RHO | SPRR4 | 0.698116 | 3 | 0 | 3 |
| RHO | CACNA1G-AS1 | 0.692235 | 3 | 0 | 3 |
| RHO | MYOG | 0.684745 | 6 | 0 | 6 |
| RHO | BMP15 | 0.675716 | 6 | 0 | 5 |
| RHO | HTR1D | 0.675584 | 4 | 0 | 4 |
| RHO | DSCAM | 0.673763 | 9 | 0 | 8 |
| RHO | CGA | 0.672458 | 5 | 0 | 5 |
| RHO | MC2R | 0.66876 | 8 | 0 | 7 |
| RHO | HPCA | 0.66471 | 5 | 0 | 4 |
| RHO | ODF1 | 0.662956 | 6 | 0 | 6 |
| RHO | FSTL4 | 0.661836 | 5 | 0 | 4 |
| RHO | HSD3B1 | 0.661197 | 5 | 0 | 4 |
| RHO | ADAM30 | 0.659116 | 5 | 0 | 4 |
| RHO | EPOR | 0.658307 | 8 | 0 | 7 |
| RHO | KLK14 | 0.658062 | 4 | 0 | 3 |
| RHO | TRPV5 | 0.654781 | 6 | 0 | 6 |
| RHO | SLC28A1 | 0.654578 | 7 | 0 | 6 |
For details and further investigation, click here
