| Full name: long intergenic non-protein coding RNA 636 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 3q13.12 | ||
| Entrez ID: 285205 | HGNC ID: HGNC:27702 | Ensembl Gene: ENSG00000240423 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00636:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00636 | 285205 | 1560514_at | -0.0069 | 0.9822 | |
| GSE26886 | LINC00636 | 285205 | 1560514_at | 0.1169 | 0.1845 | |
| GSE45670 | LINC00636 | 285205 | 1560514_at | 0.0117 | 0.8984 | |
| GSE53622 | LINC00636 | 285205 | 78346 | -1.0236 | 0.0000 | |
| GSE53624 | LINC00636 | 285205 | 78346 | -0.2408 | 0.1768 | |
| GSE63941 | LINC00636 | 285205 | 1560514_at | 0.1155 | 0.5014 | |
| GSE77861 | LINC00636 | 285205 | 1560514_at | -0.0544 | 0.4956 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by LINC00636 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00636:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00636 | 285205 | 18 | 1 | 11 | |
| GSE20123 | LINC00636 | 285205 | 17 | 1 | 12 | |
| GSE43470 | LINC00636 | 285205 | 18 | 1 | 24 | |
| GSE46452 | LINC00636 | 285205 | 12 | 6 | 41 | |
| GSE47630 | LINC00636 | 285205 | 16 | 6 | 18 | |
| GSE54993 | LINC00636 | 285205 | 2 | 5 | 63 | |
| GSE54994 | LINC00636 | 285205 | 28 | 5 | 20 | |
| GSE60625 | LINC00636 | 285205 | 0 | 6 | 5 | |
| GSE74703 | LINC00636 | 285205 | 15 | 1 | 20 | |
| GSE74704 | LINC00636 | 285205 | 14 | 1 | 5 | |
| TCGA | LINC00636 | 285205 | 50 | 8 | 38 |
Total number of gains: 190; Total number of losses: 41; Total Number of normals: 257.
Somatic mutations of LINC00636:
Generating mutation plots.
Highly correlated genes for LINC00636:
Showing top 20/22 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00636 | LINC01056 | 0.673701 | 3 | 0 | 3 |
| LINC00636 | LIMD1-AS1 | 0.651469 | 3 | 0 | 3 |
| LINC00636 | AMHR2 | 0.619085 | 4 | 0 | 3 |
| LINC00636 | DNAAF1 | 0.606221 | 3 | 0 | 3 |
| LINC00636 | BEGAIN | 0.600478 | 3 | 0 | 3 |
| LINC00636 | RNF151 | 0.596257 | 3 | 0 | 3 |
| LINC00636 | ZNF169 | 0.586066 | 3 | 0 | 3 |
| LINC00636 | GSC | 0.584766 | 4 | 0 | 3 |
| LINC00636 | TRIM54 | 0.581841 | 3 | 0 | 3 |
| LINC00636 | CHRNA2 | 0.569342 | 4 | 0 | 3 |
| LINC00636 | DMRTB1 | 0.566646 | 3 | 0 | 3 |
| LINC00636 | NOTUM | 0.560463 | 3 | 0 | 3 |
| LINC00636 | KNCN | 0.556627 | 3 | 0 | 3 |
| LINC00636 | FGF21 | 0.555842 | 3 | 0 | 3 |
| LINC00636 | SLC6A17 | 0.552995 | 4 | 0 | 3 |
| LINC00636 | NPR1 | 0.552769 | 4 | 0 | 3 |
| LINC00636 | IQCF3 | 0.551869 | 4 | 0 | 3 |
| LINC00636 | PDE1B | 0.546962 | 3 | 0 | 3 |
| LINC00636 | GPR62 | 0.540783 | 5 | 0 | 3 |
| LINC00636 | PDE6G | 0.540393 | 4 | 0 | 4 |
For details and further investigation, click here
