| Full name: long intergenic non-protein coding RNA 1056 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 20q13.33 | ||
| Entrez ID: 100144597 | HGNC ID: HGNC:49050 | Ensembl Gene: ENSG00000237119 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC01056:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC01056 | 100144597 | 1557892_at | -0.1434 | 0.6311 | |
| GSE26886 | LINC01056 | 100144597 | 1557892_at | -0.2033 | 0.0696 | |
| GSE45670 | LINC01056 | 100144597 | 1557892_at | 0.0304 | 0.7617 | |
| GSE53622 | LINC01056 | 100144597 | 47848 | -0.0560 | 0.4563 | |
| GSE53624 | LINC01056 | 100144597 | 47848 | -0.0332 | 0.5929 | |
| GSE63941 | LINC01056 | 100144597 | 1557892_at | 0.1681 | 0.3037 | |
| GSE77861 | LINC01056 | 100144597 | 1557892_at | -0.1670 | 0.0752 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC01056 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC01056:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC01056 | 100144597 | 14 | 2 | 14 | |
| GSE20123 | LINC01056 | 100144597 | 14 | 2 | 14 | |
| GSE43470 | LINC01056 | 100144597 | 11 | 1 | 31 | |
| GSE46452 | LINC01056 | 100144597 | 35 | 0 | 24 | |
| GSE47630 | LINC01056 | 100144597 | 25 | 1 | 14 | |
| GSE54993 | LINC01056 | 100144597 | 0 | 17 | 53 | |
| GSE54994 | LINC01056 | 100144597 | 29 | 0 | 24 | |
| GSE60625 | LINC01056 | 100144597 | 0 | 0 | 11 | |
| GSE74703 | LINC01056 | 100144597 | 10 | 0 | 26 | |
| GSE74704 | LINC01056 | 100144597 | 11 | 0 | 9 |
Total number of gains: 149; Total number of losses: 23; Total Number of normals: 220.
Somatic mutations of LINC01056:
Generating mutation plots.
Highly correlated genes for LINC01056:
Showing top 20/79 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC01056 | LINC01015 | 0.734412 | 3 | 0 | 3 |
| LINC01056 | BRSK2 | 0.707141 | 3 | 0 | 3 |
| LINC01056 | ABCC8 | 0.697838 | 3 | 0 | 3 |
| LINC01056 | LINC00636 | 0.673701 | 3 | 0 | 3 |
| LINC01056 | LINC01210 | 0.668883 | 3 | 0 | 3 |
| LINC01056 | CDRT1 | 0.648649 | 3 | 0 | 3 |
| LINC01056 | KLF14 | 0.637821 | 4 | 0 | 3 |
| LINC01056 | CRYBB3 | 0.629682 | 4 | 0 | 3 |
| LINC01056 | MYBPH | 0.628492 | 3 | 0 | 3 |
| LINC01056 | MEGF11 | 0.628261 | 4 | 0 | 3 |
| LINC01056 | TTTY11 | 0.62703 | 3 | 0 | 3 |
| LINC01056 | LINC00851 | 0.625288 | 3 | 0 | 3 |
| LINC01056 | TMEM225 | 0.621909 | 3 | 0 | 3 |
| LINC01056 | KIR2DS1 | 0.617714 | 4 | 0 | 3 |
| LINC01056 | PELI1 | 0.614984 | 3 | 0 | 3 |
| LINC01056 | ERVV-1 | 0.61455 | 4 | 0 | 3 |
| LINC01056 | C10orf71-AS1 | 0.612231 | 4 | 0 | 3 |
| LINC01056 | GJA8 | 0.610225 | 4 | 0 | 3 |
| LINC01056 | APOA1 | 0.606508 | 3 | 0 | 3 |
| LINC01056 | MPZL3 | 0.603582 | 3 | 0 | 3 |
For details and further investigation, click here
