| Full name: long intergenic non-protein coding RNA 661 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 19p13.12 | ||
| Entrez ID: 126536 | HGNC ID: HGNC:27002 | Ensembl Gene: ENSG00000205396 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00661:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00661 | 126536 | 237242_at | -0.2771 | 0.2497 | |
| GSE26886 | LINC00661 | 126536 | 237242_at | 0.1657 | 0.1326 | |
| GSE45670 | LINC00661 | 126536 | 237242_at | 0.0144 | 0.9123 | |
| GSE53622 | LINC00661 | 126536 | 59947 | -0.4051 | 0.0027 | |
| GSE53624 | LINC00661 | 126536 | 19173 | 0.2426 | 0.1963 | |
| GSE63941 | LINC00661 | 126536 | 237242_at | 0.1305 | 0.3800 | |
| GSE77861 | LINC00661 | 126536 | 237242_at | -0.1284 | 0.1495 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC00661 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00661:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00661 | 126536 | 4 | 3 | 23 | |
| GSE20123 | LINC00661 | 126536 | 3 | 2 | 25 | |
| GSE43470 | LINC00661 | 126536 | 2 | 6 | 35 | |
| GSE46452 | LINC00661 | 126536 | 47 | 1 | 11 | |
| GSE47630 | LINC00661 | 126536 | 4 | 8 | 28 | |
| GSE54993 | LINC00661 | 126536 | 15 | 4 | 51 | |
| GSE54994 | LINC00661 | 126536 | 6 | 14 | 33 | |
| GSE60625 | LINC00661 | 126536 | 9 | 0 | 2 | |
| GSE74703 | LINC00661 | 126536 | 2 | 4 | 30 | |
| GSE74704 | LINC00661 | 126536 | 0 | 1 | 19 | |
| TCGA | LINC00661 | 126536 | 18 | 12 | 66 |
Total number of gains: 110; Total number of losses: 55; Total Number of normals: 323.
Somatic mutations of LINC00661:
Generating mutation plots.
Highly correlated genes for LINC00661:
Showing top 20/203 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00661 | MRGPRG-AS1 | 0.737788 | 3 | 0 | 3 |
| LINC00661 | COX6A2 | 0.680421 | 4 | 0 | 4 |
| LINC00661 | SEC14L5 | 0.679291 | 3 | 0 | 3 |
| LINC00661 | SPACA3 | 0.673978 | 3 | 0 | 3 |
| LINC00661 | LCN8 | 0.666102 | 3 | 0 | 3 |
| LINC00661 | LELP1 | 0.66316 | 4 | 0 | 3 |
| LINC00661 | JOSD2 | 0.660539 | 3 | 0 | 3 |
| LINC00661 | CYP3A43 | 0.654649 | 3 | 0 | 3 |
| LINC00661 | MAGEC1 | 0.65456 | 4 | 0 | 4 |
| LINC00661 | ROM1 | 0.652449 | 4 | 0 | 3 |
| LINC00661 | GLI4 | 0.649846 | 5 | 0 | 4 |
| LINC00661 | APOBEC1 | 0.64729 | 3 | 0 | 3 |
| LINC00661 | KEL | 0.642174 | 3 | 0 | 3 |
| LINC00661 | G6PC2 | 0.63955 | 3 | 0 | 3 |
| LINC00661 | SLC6A17 | 0.635023 | 3 | 0 | 3 |
| LINC00661 | FSCN3 | 0.633896 | 3 | 0 | 3 |
| LINC00661 | SPSB4 | 0.632549 | 3 | 0 | 3 |
| LINC00661 | TRAF3IP2-AS1 | 0.628764 | 3 | 0 | 3 |
| LINC00661 | KIF19 | 0.628647 | 4 | 0 | 4 |
| LINC00661 | MFSD6L | 0.626937 | 3 | 0 | 3 |
For details and further investigation, click here
