| Full name: long intergenic non-protein coding RNA 909 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 18q22.3 | ||
| Entrez ID: 400657 | HGNC ID: HGNC:44331 | Ensembl Gene: ENSG00000264247 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC00909:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00909 | 400657 | 226924_at | -0.3198 | 0.4813 | |
| GSE26886 | LINC00909 | 400657 | 226924_at | 0.3553 | 0.3092 | |
| GSE45670 | LINC00909 | 400657 | 226924_at | 0.0884 | 0.6536 | |
| GSE53622 | LINC00909 | 400657 | 6469 | 0.1660 | 0.0826 | |
| GSE53624 | LINC00909 | 400657 | 62395 | 0.1753 | 0.2543 | |
| GSE63941 | LINC00909 | 400657 | 226924_at | -0.6360 | 0.3066 | |
| GSE77861 | LINC00909 | 400657 | 226924_at | 0.2681 | 0.3225 | |
| SRP007169 | LINC00909 | 400657 | RNAseq | -0.2148 | 0.7037 | |
| SRP064894 | LINC00909 | 400657 | RNAseq | 0.0670 | 0.7002 | |
| SRP133303 | LINC00909 | 400657 | RNAseq | 0.1380 | 0.2049 | |
| SRP159526 | LINC00909 | 400657 | RNAseq | -0.0587 | 0.8371 | |
| SRP193095 | LINC00909 | 400657 | RNAseq | -0.1063 | 0.2506 | |
| SRP219564 | LINC00909 | 400657 | RNAseq | -0.3378 | 0.4128 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC00909 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00909:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00909 | 400657 | 0 | 11 | 19 | |
| GSE20123 | LINC00909 | 400657 | 0 | 11 | 19 | |
| GSE43470 | LINC00909 | 400657 | 0 | 7 | 36 | |
| GSE46452 | LINC00909 | 400657 | 1 | 26 | 32 | |
| GSE47630 | LINC00909 | 400657 | 5 | 21 | 14 | |
| GSE54993 | LINC00909 | 400657 | 9 | 0 | 61 | |
| GSE54994 | LINC00909 | 400657 | 1 | 18 | 34 | |
| GSE60625 | LINC00909 | 400657 | 0 | 4 | 7 | |
| GSE74703 | LINC00909 | 400657 | 0 | 6 | 30 | |
| GSE74704 | LINC00909 | 400657 | 0 | 9 | 11 | |
| TCGA | LINC00909 | 400657 | 7 | 46 | 43 |
Total number of gains: 23; Total number of losses: 159; Total Number of normals: 306.
Somatic mutations of LINC00909:
Generating mutation plots.
Highly correlated genes for LINC00909:
Showing all 20 correlated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00909 | PRKAR2B | 0.685125 | 3 | 0 | 3 |
| LINC00909 | TSPYL5 | 0.661188 | 3 | 0 | 3 |
| LINC00909 | PELI2 | 0.657718 | 4 | 0 | 4 |
| LINC00909 | OPRL1 | 0.628548 | 3 | 0 | 3 |
| LINC00909 | CNTNAP1 | 0.61136 | 3 | 0 | 3 |
| LINC00909 | ZNF419 | 0.597338 | 4 | 0 | 3 |
| LINC00909 | SYNM | 0.589645 | 3 | 0 | 3 |
| LINC00909 | FZD7 | 0.582703 | 3 | 0 | 3 |
| LINC00909 | CREBZF | 0.582464 | 3 | 0 | 3 |
| LINC00909 | ZNF407 | 0.573738 | 4 | 0 | 3 |
| LINC00909 | ZNF596 | 0.566839 | 4 | 0 | 4 |
| LINC00909 | TSHZ1 | 0.563997 | 4 | 0 | 3 |
| LINC00909 | LAMA2 | 0.563139 | 3 | 0 | 3 |
| LINC00909 | FAM120C | 0.562272 | 3 | 0 | 3 |
| LINC00909 | TUSC1 | 0.545295 | 4 | 0 | 3 |
| LINC00909 | AUTS2 | 0.53835 | 4 | 0 | 3 |
| LINC00909 | PARP4 | 0.534429 | 4 | 0 | 3 |
| LINC00909 | CD164 | 0.528817 | 4 | 0 | 3 |
| LINC00909 | KLHL12 | 0.52864 | 3 | 0 | 3 |
| LINC00909 | CASC4 | 0.523378 | 3 | 0 | 3 |
For details and further investigation, click here
