| Full name: long intergenic non-protein coding RNA 1069 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 13q22.3 | ||
| Entrez ID: 101927176 | HGNC ID: HGNC:49109 | Ensembl Gene: ENSG00000236133 | OMIM ID: |
Expression of LINC01069:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC01069 | 101927176 | 1561298_at | 0.1988 | 0.4710 | |
| GSE26886 | LINC01069 | 101927176 | 1561298_at | 0.0030 | 0.9823 | |
| GSE45670 | LINC01069 | 101927176 | 1561298_at | 0.0224 | 0.8052 | |
| GSE53622 | LINC01069 | 101927176 | 16429 | 0.0519 | 0.7069 | |
| GSE53624 | LINC01069 | 101927176 | 16429 | 0.1896 | 0.0289 | |
| GSE63941 | LINC01069 | 101927176 | 1561298_at | 0.1634 | 0.1231 | |
| GSE77861 | LINC01069 | 101927176 | 1561298_at | -0.0287 | 0.8141 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC01069 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC01069:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC01069 | 101927176 | 4 | 11 | 15 | |
| GSE20123 | LINC01069 | 101927176 | 4 | 10 | 16 | |
| GSE43470 | LINC01069 | 101927176 | 4 | 11 | 28 | |
| GSE46452 | LINC01069 | 101927176 | 0 | 32 | 27 | |
| GSE47630 | LINC01069 | 101927176 | 3 | 27 | 10 | |
| GSE54993 | LINC01069 | 101927176 | 11 | 3 | 56 | |
| GSE54994 | LINC01069 | 101927176 | 3 | 14 | 36 | |
| GSE60625 | LINC01069 | 101927176 | 0 | 3 | 8 | |
| GSE74703 | LINC01069 | 101927176 | 3 | 9 | 24 | |
| GSE74704 | LINC01069 | 101927176 | 2 | 9 | 9 |
Total number of gains: 34; Total number of losses: 129; Total Number of normals: 229.
Somatic mutations of LINC01069:
Generating mutation plots.
Highly correlated genes for LINC01069:
Showing top 20/23 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC01069 | LINC00642 | 0.657944 | 3 | 0 | 3 |
| LINC01069 | TTBK1 | 0.637735 | 4 | 0 | 4 |
| LINC01069 | RAB3IL1 | 0.635144 | 3 | 0 | 3 |
| LINC01069 | KRTAP4-9 | 0.633002 | 3 | 0 | 3 |
| LINC01069 | C20orf203 | 0.627881 | 4 | 0 | 3 |
| LINC01069 | GNAO1 | 0.621699 | 4 | 0 | 4 |
| LINC01069 | WDR11-AS1 | 0.61702 | 3 | 0 | 3 |
| LINC01069 | MS4A12 | 0.604658 | 3 | 0 | 3 |
| LINC01069 | SEMA4G | 0.575957 | 3 | 0 | 3 |
| LINC01069 | KIR2DL5A | 0.570489 | 3 | 0 | 3 |
| LINC01069 | TPSG1 | 0.556218 | 4 | 0 | 3 |
| LINC01069 | KIR2DL4 | 0.553845 | 4 | 0 | 3 |
| LINC01069 | KRTAP8-1 | 0.549568 | 4 | 0 | 3 |
| LINC01069 | DNAJC5B | 0.54581 | 3 | 0 | 3 |
| LINC01069 | CLRN1 | 0.543001 | 4 | 0 | 3 |
| LINC01069 | GALNTL5 | 0.539862 | 4 | 0 | 3 |
| LINC01069 | NAT8L | 0.535523 | 3 | 0 | 3 |
| LINC01069 | TMCC1-AS1 | 0.518047 | 3 | 0 | 3 |
| LINC01069 | TAS2R7 | 0.517974 | 4 | 0 | 3 |
| LINC01069 | C2orf72 | 0.515495 | 6 | 0 | 3 |
For details and further investigation, click here
