RAB3IL1

 

Full name: RAB3A interacting protein like 1 Alias Symbol: GRAB
Type: protein-coding gene Cytoband: 11q12.2-q12.3
Entrez ID: 5866 HGNC ID: HGNC:9780 Ensembl Gene: ENSG00000167994 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of RAB3IL1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 RAB3IL1 5866 219579_at 0.1278 0.4976
GSE20347 RAB3IL1 5866 219579_at 0.1057 0.4094
GSE23400 RAB3IL1 5866 219579_at -0.0404 0.2938
GSE26886 RAB3IL1 5866 219579_at 0.0257 0.8523
GSE29001 RAB3IL1 5866 219579_at -0.1995 0.2802
GSE38129 RAB3IL1 5866 219579_at -0.1466 0.3746
GSE45670 RAB3IL1 5866 219579_at 0.1307 0.1965
GSE53622 RAB3IL1 5866 27996 0.4279 0.0000
GSE53624 RAB3IL1 5866 27996 0.6232 0.0000
GSE63941 RAB3IL1 5866 219579_at 0.8282 0.0006
GSE77861 RAB3IL1 5866 219579_at 0.0162 0.8961
GSE97050 RAB3IL1 5866 A_23_P75800 -0.0229 0.9411
SRP007169 RAB3IL1 5866 RNAseq 2.9865 0.0010
SRP064894 RAB3IL1 5866 RNAseq 0.5755 0.1398
SRP133303 RAB3IL1 5866 RNAseq 0.7372 0.0311
SRP159526 RAB3IL1 5866 RNAseq 1.1717 0.0005
SRP193095 RAB3IL1 5866 RNAseq 1.8079 0.0000
SRP219564 RAB3IL1 5866 RNAseq 0.9991 0.0649
TCGA RAB3IL1 5866 RNAseq 0.1254 0.3579

Upregulated datasets: 3; Downregulated datasets: 0.  


 

Survival by RAB3IL1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of RAB3IL1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 RAB3IL1 5866 5 5 20
GSE20123 RAB3IL1 5866 5 5 20
GSE43470 RAB3IL1 5866 2 6 35
GSE46452 RAB3IL1 5866 8 4 47
GSE47630 RAB3IL1 5866 3 7 30
GSE54993 RAB3IL1 5866 3 0 67
GSE54994 RAB3IL1 5866 4 5 44
GSE60625 RAB3IL1 5866 0 3 8
GSE74703 RAB3IL1 5866 2 3 31
GSE74704 RAB3IL1 5866 4 3 13
TCGA RAB3IL1 5866 14 10 72

Total number of gains: 50; Total number of losses: 51; Total Number of normals: 387.  


 

Somatic mutations of RAB3IL1:

 

Generating mutation plots.

 

Highly correlated genes for RAB3IL1:

 

Showing top 20/809 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
RAB3IL1TRAPPC90.862382303
RAB3IL1SIGLEC80.788598303
RAB3IL1SLC12A30.75998404
RAB3IL1MAT1A0.758933505
RAB3IL1PTCRA0.73963605
RAB3IL1SPINT30.733052505
RAB3IL1HSF40.731904505
RAB3IL1ZNF4460.731773404
RAB3IL1EPB41L4B0.728751303
RAB3IL1TRPM30.727463605
RAB3IL1BCAN0.727009707
RAB3IL1TNP10.724603403
RAB3IL1TAF5L0.72098303
RAB3IL1REG3A0.71753504
RAB3IL1ABCG40.716995303
RAB3IL1ODF10.714226404
RAB3IL1STAC20.711924303
RAB3IL1TXNDC20.702014404
RAB3IL1FSCN30.699729604
RAB3IL1PTPRCAP0.699603303

For details and further investigation, click here