LINC01101

 

Full name: long intergenic non-protein coding RNA 1101 Alias Symbol: FLJ14816
Type: non-coding RNA Cytoband: 2q14.2
Entrez ID: 84931 HGNC ID: HGNC:25923 Ensembl Gene: ENSG00000280409 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of LINC01101:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 LINC01101 84931 1553385_at -0.1210 0.6065
GSE26886 LINC01101 84931 1553385_at 0.1883 0.0517
GSE45670 LINC01101 84931 1553385_at 0.0659 0.5049
GSE53622 LINC01101 84931 53766 0.2913 0.0037
GSE53624 LINC01101 84931 53766 0.2233 0.0350
GSE63941 LINC01101 84931 1553385_at 0.1940 0.2318
GSE77861 LINC01101 84931 1553385_at -0.0645 0.4244

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by LINC01101 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  


Copy number change of LINC01101:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 LINC01101 84931 6 2 22
GSE20123 LINC01101 84931 6 2 22
GSE43470 LINC01101 84931 3 1 39
GSE46452 LINC01101 84931 2 3 54
GSE47630 LINC01101 84931 6 0 34
GSE54993 LINC01101 84931 0 6 64
GSE54994 LINC01101 84931 13 0 40
GSE60625 LINC01101 84931 0 3 8
GSE74703 LINC01101 84931 3 1 32
GSE74704 LINC01101 84931 3 1 16

Total number of gains: 42; Total number of losses: 19; Total Number of normals: 331.  


 

Somatic mutations of LINC01101:

 

Generating mutation plots.

 

Highly correlated genes for LINC01101:

 

Showing top 20/152 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
LINC01101SLC4A80.795588303
LINC01101USP2-AS10.788842303
LINC01101KLF170.775005303
LINC01101SERPINA100.764093303
LINC01101BFSP2-AS10.748563303
LINC01101DEFB108B0.740159303
LINC01101ADAM80.726798303
LINC01101RNF1800.714314303
LINC01101NRL0.708967303
LINC01101ALPI0.70673403
LINC01101CATSPERG0.701526403
LINC01101RXFP30.699402303
LINC01101ACAN0.693979303
LINC01101SLC22A120.686837303
LINC01101LINC006320.686033403
LINC01101MDH1B0.685286303
LINC01101TMEM150A0.681745303
LINC01101SNED10.681599303
LINC01101DEFB1210.680589403
LINC01101MEGF110.663532303

For details and further investigation, click here