| Full name: leucine rich repeat containing 19 | Alias Symbol: FLJ21302 | ||
| Type: protein-coding gene | Cytoband: 9p21.2 | ||
| Entrez ID: 64922 | HGNC ID: HGNC:23379 | Ensembl Gene: ENSG00000184434 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LRRC19:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LRRC19 | 64922 | 220376_at | -0.0290 | 0.9130 | |
| GSE20347 | LRRC19 | 64922 | 220376_at | -0.0726 | 0.1163 | |
| GSE23400 | LRRC19 | 64922 | 220376_at | -0.0437 | 0.0263 | |
| GSE26886 | LRRC19 | 64922 | 220376_at | 0.0850 | 0.2760 | |
| GSE29001 | LRRC19 | 64922 | 220376_at | -0.0703 | 0.4375 | |
| GSE38129 | LRRC19 | 64922 | 220376_at | -0.0981 | 0.0091 | |
| GSE45670 | LRRC19 | 64922 | 220376_at | -0.0189 | 0.8192 | |
| GSE63941 | LRRC19 | 64922 | 220376_at | 0.2564 | 0.2002 | |
| GSE77861 | LRRC19 | 64922 | 220376_at | -0.0369 | 0.6730 | |
| GSE97050 | LRRC19 | 64922 | A_23_P364625 | 0.1731 | 0.4212 | |
| SRP133303 | LRRC19 | 64922 | RNAseq | 0.1390 | 0.5650 | |
| SRP159526 | LRRC19 | 64922 | RNAseq | 0.9027 | 0.0746 | |
| SRP193095 | LRRC19 | 64922 | RNAseq | -0.1768 | 0.2826 | |
| TCGA | LRRC19 | 64922 | RNAseq | 0.4218 | 0.1485 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LRRC19 expression:
 |
| TCGA |
Note: Click image to view full size file.
Copy number change of LRRC19:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LRRC19 | 64922 | 2 | 14 | 14 | |
| GSE20123 | LRRC19 | 64922 | 2 | 14 | 14 | |
| GSE43470 | LRRC19 | 64922 | 2 | 11 | 30 | |
| GSE46452 | LRRC19 | 64922 | 6 | 18 | 35 | |
| GSE47630 | LRRC19 | 64922 | 1 | 22 | 17 | |
| GSE54993 | LRRC19 | 64922 | 7 | 0 | 63 | |
| GSE54994 | LRRC19 | 64922 | 7 | 15 | 31 | |
| GSE60625 | LRRC19 | 64922 | 0 | 0 | 11 | |
| GSE74703 | LRRC19 | 64922 | 2 | 8 | 26 | |
| GSE74704 | LRRC19 | 64922 | 0 | 11 | 9 | |
| TCGA | LRRC19 | 64922 | 16 | 46 | 34 |
Total number of gains: 45; Total number of losses: 159; Total Number of normals: 284.
Somatic mutations of LRRC19:
Generating mutation plots.
Highly correlated genes for LRRC19:
Showing top 20/137 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LRRC19 | KRT35 | 0.712638 | 3 | 0 | 3 |
| LRRC19 | ADAM21 | 0.702156 | 3 | 0 | 3 |
| LRRC19 | C3orf20 | 0.676485 | 3 | 0 | 3 |
| LRRC19 | HUS1B | 0.666028 | 3 | 0 | 3 |
| LRRC19 | SH2D1B | 0.659342 | 3 | 0 | 3 |
| LRRC19 | CLEC4M | 0.646286 | 4 | 0 | 3 |
| LRRC19 | CDX2 | 0.62923 | 4 | 0 | 3 |
| LRRC19 | GPR32 | 0.628263 | 4 | 0 | 3 |
| LRRC19 | GPR182 | 0.620316 | 4 | 0 | 3 |
| LRRC19 | AGRP | 0.61946 | 5 | 0 | 4 |
| LRRC19 | FOLH1 | 0.614857 | 6 | 0 | 3 |
| LRRC19 | REG3A | 0.61402 | 5 | 0 | 3 |
| LRRC19 | RASGRF1 | 0.608953 | 3 | 0 | 3 |
| LRRC19 | CTSE | 0.607325 | 4 | 0 | 3 |
| LRRC19 | C3orf36 | 0.605529 | 6 | 0 | 4 |
| LRRC19 | GALR2 | 0.605241 | 4 | 0 | 3 |
| LRRC19 | CABP7 | 0.602817 | 4 | 0 | 3 |
| LRRC19 | CRYGN | 0.602788 | 4 | 0 | 3 |
| LRRC19 | OR12D3 | 0.599236 | 4 | 0 | 3 |
| LRRC19 | ANKFN1 | 0.59757 | 5 | 0 | 5 |
For details and further investigation, click here
