| Full name: chromosome 3 open reading frame 20 | Alias Symbol: DKFZP434N1817 | ||
| Type: protein-coding gene | Cytoband: 3p25.1 | ||
| Entrez ID: 84077 | HGNC ID: HGNC:25320 | Ensembl Gene: ENSG00000131379 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of C3orf20:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | C3orf20 | 84077 | 224273_at | -0.0394 | 0.9200 | |
| GSE26886 | C3orf20 | 84077 | 224273_at | 0.2554 | 0.0728 | |
| GSE45670 | C3orf20 | 84077 | 224273_at | -0.0754 | 0.5719 | |
| GSE53622 | C3orf20 | 84077 | 24646 | -1.8842 | 0.0000 | |
| GSE53624 | C3orf20 | 84077 | 24646 | -2.0373 | 0.0000 | |
| GSE63941 | C3orf20 | 84077 | 224273_at | 0.4187 | 0.0219 | |
| GSE77861 | C3orf20 | 84077 | 224273_at | -0.0961 | 0.4136 | |
| GSE97050 | C3orf20 | 84077 | A_23_P361333 | -0.7112 | 0.2880 | |
| TCGA | C3orf20 | 84077 | RNAseq | 0.1188 | 0.9014 |
Upregulated datasets: 0; Downregulated datasets: 2.
Survival by C3orf20 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of C3orf20:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | C3orf20 | 84077 | 1 | 19 | 10 | |
| GSE20123 | C3orf20 | 84077 | 1 | 19 | 10 | |
| GSE43470 | C3orf20 | 84077 | 0 | 21 | 22 | |
| GSE46452 | C3orf20 | 84077 | 2 | 17 | 40 | |
| GSE47630 | C3orf20 | 84077 | 2 | 23 | 15 | |
| GSE54993 | C3orf20 | 84077 | 6 | 1 | 63 | |
| GSE54994 | C3orf20 | 84077 | 1 | 32 | 20 | |
| GSE60625 | C3orf20 | 84077 | 5 | 0 | 6 | |
| GSE74703 | C3orf20 | 84077 | 0 | 17 | 19 | |
| GSE74704 | C3orf20 | 84077 | 1 | 12 | 7 | |
| TCGA | C3orf20 | 84077 | 2 | 68 | 26 |
Total number of gains: 21; Total number of losses: 229; Total Number of normals: 238.
Somatic mutations of C3orf20:
Generating mutation plots.
Highly correlated genes for C3orf20:
Showing top 20/392 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| C3orf20 | NCCRP1 | 0.882052 | 3 | 0 | 3 |
| C3orf20 | IL36A | 0.864855 | 3 | 0 | 3 |
| C3orf20 | FAM163B | 0.838772 | 3 | 0 | 3 |
| C3orf20 | IVL | 0.829463 | 3 | 0 | 3 |
| C3orf20 | KPRP | 0.823829 | 3 | 0 | 3 |
| C3orf20 | TMPRSS11A | 0.812245 | 3 | 0 | 3 |
| C3orf20 | OTOP3 | 0.810028 | 3 | 0 | 3 |
| C3orf20 | IL18 | 0.80943 | 3 | 0 | 3 |
| C3orf20 | ACER1 | 0.805313 | 3 | 0 | 3 |
| C3orf20 | RNF222 | 0.804886 | 3 | 0 | 3 |
| C3orf20 | ATP6V0A4 | 0.803208 | 3 | 0 | 3 |
| C3orf20 | SPRR2A | 0.797776 | 3 | 0 | 3 |
| C3orf20 | CRABP2 | 0.79736 | 4 | 0 | 4 |
| C3orf20 | MUC22 | 0.794887 | 3 | 0 | 3 |
| C3orf20 | SYNPO2L | 0.793558 | 3 | 0 | 3 |
| C3orf20 | MORN3 | 0.792569 | 3 | 0 | 3 |
| C3orf20 | SAMD9 | 0.787327 | 3 | 0 | 3 |
| C3orf20 | SPRR2F | 0.787278 | 3 | 0 | 3 |
| C3orf20 | ELN | 0.784303 | 3 | 0 | 3 |
| C3orf20 | SPRR3 | 0.782761 | 3 | 0 | 3 |
For details and further investigation, click here
