LZTR1

 

Full name: leucine zipper like transcription regulator 1 Alias Symbol: LZTR-1|BTBD29
Type: protein-coding gene Cytoband: 22q11.21
Entrez ID: 8216 HGNC ID: HGNC:6742 Ensembl Gene: ENSG00000099949 OMIM ID: 600574
Drug and gene relationship at DGIdb
Screen Evidence:
  • This gene has been idenfitied as a common driver in this paper.
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of LZTR1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 LZTR1 8216 203412_at 0.2613 0.3331
GSE20347 LZTR1 8216 203412_at 0.2043 0.0399
GSE23400 LZTR1 8216 203412_at 0.2213 0.0000
GSE26886 LZTR1 8216 203412_at 0.5648 0.0000
GSE29001 LZTR1 8216 203412_at 0.1320 0.6064
GSE38129 LZTR1 8216 203412_at 0.1533 0.2445
GSE45670 LZTR1 8216 203412_at 0.4536 0.0843
GSE53622 LZTR1 8216 77515 0.1647 0.1229
GSE53624 LZTR1 8216 77515 0.4289 0.0000
GSE63941 LZTR1 8216 203412_at -0.3211 0.3661
GSE77861 LZTR1 8216 203412_at 0.3491 0.0284
GSE97050 LZTR1 8216 A_23_P57401 -0.0822 0.7123
SRP007169 LZTR1 8216 RNAseq 0.9996 0.0077
SRP008496 LZTR1 8216 RNAseq 1.1813 0.0000
SRP064894 LZTR1 8216 RNAseq 0.9136 0.0000
SRP133303 LZTR1 8216 RNAseq 0.2272 0.1058
SRP159526 LZTR1 8216 RNAseq 0.3026 0.3406
SRP193095 LZTR1 8216 RNAseq 0.6328 0.0000
SRP219564 LZTR1 8216 RNAseq 0.4650 0.0566
TCGA LZTR1 8216 RNAseq 0.0374 0.4828

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by LZTR1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of LZTR1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 LZTR1 8216 6 7 17
GSE20123 LZTR1 8216 6 7 17
GSE43470 LZTR1 8216 3 7 33
GSE46452 LZTR1 8216 33 1 25
GSE47630 LZTR1 8216 8 5 27
GSE54993 LZTR1 8216 3 6 61
GSE54994 LZTR1 8216 11 7 35
GSE60625 LZTR1 8216 5 0 6
GSE74703 LZTR1 8216 3 5 28
GSE74704 LZTR1 8216 3 4 13
TCGA LZTR1 8216 27 17 52

Total number of gains: 108; Total number of losses: 66; Total Number of normals: 314.  


 

Somatic mutations of LZTR1:

 

Generating mutation plots.

 

Highly correlated genes for LZTR1:

 

Showing top 20/686 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
LZTR1FILIP10.80527303
LZTR1RILPL10.712134504
LZTR1SNAPC20.698794505
LZTR1PDE3A0.693255303
LZTR1CCDC90.68338403
LZTR1AP2A10.673406303
LZTR1PBXIP10.665926505
LZTR1HMCN10.664065404
LZTR1S1PR30.663631404
LZTR1TGFB1I10.663389504
LZTR1CAND20.662291303
LZTR1DOCK110.661888303
LZTR1TMEM161A0.654817705
LZTR1RGS20.652091303
LZTR1FGF20.651217403
LZTR1TSPYL20.647916504
LZTR1POGZ0.646925303
LZTR1SLC39A30.646091404
LZTR1STK32B0.643594403
LZTR1PLEKHO10.643406504

For details and further investigation, click here