| Full name: solute carrier family 39 member 3 | Alias Symbol: ZIP3 | ||
| Type: protein-coding gene | Cytoband: 19p13.3 | ||
| Entrez ID: 29985 | HGNC ID: HGNC:17128 | Ensembl Gene: ENSG00000141873 | OMIM ID: 612168 |
Expression of SLC39A3:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SLC39A3 | 29985 | 223917_s_at | 0.6231 | 0.1348 | |
| GSE26886 | SLC39A3 | 29985 | 223917_s_at | 0.7244 | 0.0000 | |
| GSE45670 | SLC39A3 | 29985 | 223917_s_at | 0.5178 | 0.0001 | |
| GSE63941 | SLC39A3 | 29985 | 223917_s_at | -0.0752 | 0.8638 | |
| GSE77861 | SLC39A3 | 29985 | 229677_at | -0.0138 | 0.9332 | |
| GSE97050 | SLC39A3 | 29985 | A_24_P382467 | 0.4523 | 0.1820 | |
| SRP007169 | SLC39A3 | 29985 | RNAseq | 0.1806 | 0.6647 | |
| SRP008496 | SLC39A3 | 29985 | RNAseq | 0.7821 | 0.0201 | |
| SRP064894 | SLC39A3 | 29985 | RNAseq | 1.0008 | 0.0025 | |
| SRP133303 | SLC39A3 | 29985 | RNAseq | 0.3787 | 0.0518 | |
| SRP159526 | SLC39A3 | 29985 | RNAseq | 0.6844 | 0.0017 | |
| SRP193095 | SLC39A3 | 29985 | RNAseq | 0.2970 | 0.0256 | |
| SRP219564 | SLC39A3 | 29985 | RNAseq | 0.7539 | 0.0918 | |
| TCGA | SLC39A3 | 29985 | RNAseq | 0.1211 | 0.0380 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by SLC39A3 expression:
 |
| TCGA |
Note: Click image to view full size file.
Copy number change of SLC39A3:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SLC39A3 | 29985 | 4 | 4 | 22 | |
| GSE20123 | SLC39A3 | 29985 | 3 | 4 | 23 | |
| GSE43470 | SLC39A3 | 29985 | 1 | 9 | 33 | |
| GSE46452 | SLC39A3 | 29985 | 47 | 1 | 11 | |
| GSE47630 | SLC39A3 | 29985 | 5 | 7 | 28 | |
| GSE54993 | SLC39A3 | 29985 | 16 | 3 | 51 | |
| GSE54994 | SLC39A3 | 29985 | 8 | 16 | 29 | |
| GSE60625 | SLC39A3 | 29985 | 9 | 0 | 2 | |
| GSE74703 | SLC39A3 | 29985 | 1 | 6 | 29 | |
| GSE74704 | SLC39A3 | 29985 | 1 | 3 | 16 | |
| TCGA | SLC39A3 | 29985 | 7 | 23 | 66 |
Total number of gains: 102; Total number of losses: 76; Total Number of normals: 310.
Somatic mutations of SLC39A3:
Generating mutation plots.
Highly correlated genes for SLC39A3:
Showing top 20/1114 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SLC39A3 | ZNF579 | 0.858656 | 4 | 0 | 4 |
| SLC39A3 | ADAR | 0.845996 | 4 | 0 | 4 |
| SLC39A3 | QSOX2 | 0.838195 | 3 | 0 | 3 |
| SLC39A3 | PLXNA1 | 0.837225 | 4 | 0 | 4 |
| SLC39A3 | HSPG2 | 0.837168 | 3 | 0 | 3 |
| SLC39A3 | MORC2 | 0.836103 | 4 | 0 | 4 |
| SLC39A3 | NVL | 0.826969 | 3 | 0 | 3 |
| SLC39A3 | PFDN2 | 0.826601 | 4 | 0 | 4 |
| SLC39A3 | PATZ1 | 0.826473 | 3 | 0 | 3 |
| SLC39A3 | ELFN1 | 0.825369 | 3 | 0 | 3 |
| SLC39A3 | CHD1L | 0.822419 | 3 | 0 | 3 |
| SLC39A3 | HPCAL1 | 0.821069 | 4 | 0 | 4 |
| SLC39A3 | SERPINF2 | 0.82022 | 3 | 0 | 3 |
| SLC39A3 | SLFNL1 | 0.820125 | 3 | 0 | 3 |
| SLC39A3 | MLEC | 0.819277 | 4 | 0 | 4 |
| SLC39A3 | SENP3 | 0.817598 | 3 | 0 | 3 |
| SLC39A3 | WDR54 | 0.81462 | 3 | 0 | 3 |
| SLC39A3 | PACS1 | 0.812764 | 3 | 0 | 3 |
| SLC39A3 | NCBP2 | 0.811625 | 3 | 0 | 3 |
| SLC39A3 | TESK1 | 0.807981 | 3 | 0 | 3 |
For details and further investigation, click here
