| Full name: coiled-coil domain containing 9 | Alias Symbol: DKFZP586M1019 | ||
| Type: protein-coding gene | Cytoband: 19q13.32 | ||
| Entrez ID: 26093 | HGNC ID: HGNC:24560 | Ensembl Gene: ENSG00000105321 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Screen Evidence:
| |||
Expression of CCDC9:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CCDC9 | 26093 | 206257_at | 0.1170 | 0.6447 | |
| GSE20347 | CCDC9 | 26093 | 206257_at | 0.0817 | 0.3804 | |
| GSE23400 | CCDC9 | 26093 | 206257_at | -0.0280 | 0.5352 | |
| GSE26886 | CCDC9 | 26093 | 206257_at | 0.3156 | 0.0052 | |
| GSE29001 | CCDC9 | 26093 | 206257_at | -0.0932 | 0.7124 | |
| GSE38129 | CCDC9 | 26093 | 206257_at | -0.0369 | 0.7320 | |
| GSE45670 | CCDC9 | 26093 | 206257_at | 0.1565 | 0.0392 | |
| GSE63941 | CCDC9 | 26093 | 206257_at | 0.1655 | 0.2075 | |
| GSE77861 | CCDC9 | 26093 | 206257_at | 0.0131 | 0.9139 | |
| GSE97050 | CCDC9 | 26093 | A_33_P3345936 | -0.0550 | 0.8456 | |
| SRP064894 | CCDC9 | 26093 | RNAseq | 0.2536 | 0.1696 | |
| SRP133303 | CCDC9 | 26093 | RNAseq | 0.0282 | 0.8881 | |
| SRP159526 | CCDC9 | 26093 | RNAseq | 0.1430 | 0.6281 | |
| SRP193095 | CCDC9 | 26093 | RNAseq | 0.3400 | 0.0503 | |
| SRP219564 | CCDC9 | 26093 | RNAseq | 0.3407 | 0.3288 | |
| TCGA | CCDC9 | 26093 | RNAseq | -0.1188 | 0.0310 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by CCDC9 expression:
 |
| TCGA |
Note: Click image to view full size file.
Copy number change of CCDC9:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CCDC9 | 26093 | 4 | 4 | 22 | |
| GSE20123 | CCDC9 | 26093 | 4 | 3 | 23 | |
| GSE43470 | CCDC9 | 26093 | 3 | 11 | 29 | |
| GSE46452 | CCDC9 | 26093 | 45 | 1 | 13 | |
| GSE47630 | CCDC9 | 26093 | 8 | 7 | 25 | |
| GSE54993 | CCDC9 | 26093 | 17 | 4 | 49 | |
| GSE54994 | CCDC9 | 26093 | 4 | 14 | 35 | |
| GSE60625 | CCDC9 | 26093 | 9 | 0 | 2 | |
| GSE74703 | CCDC9 | 26093 | 3 | 7 | 26 | |
| GSE74704 | CCDC9 | 26093 | 4 | 1 | 15 | |
| TCGA | CCDC9 | 26093 | 15 | 18 | 63 |
Total number of gains: 116; Total number of losses: 70; Total Number of normals: 302.
Somatic mutations of CCDC9:
Generating mutation plots.
Highly correlated genes for CCDC9:
Showing top 20/855 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CCDC9 | MYBPC3 | 0.708995 | 5 | 0 | 5 |
| CCDC9 | SCN10A | 0.700687 | 3 | 0 | 3 |
| CCDC9 | IL11 | 0.699508 | 7 | 0 | 6 |
| CCDC9 | IL25 | 0.698923 | 4 | 0 | 4 |
| CCDC9 | ZNF358 | 0.696792 | 4 | 0 | 4 |
| CCDC9 | ENTPD2 | 0.689665 | 7 | 0 | 6 |
| CCDC9 | OR10H3 | 0.686171 | 4 | 0 | 4 |
| CCDC9 | TCL6 | 0.684309 | 3 | 0 | 3 |
| CCDC9 | MAP3K19 | 0.683555 | 5 | 0 | 4 |
| CCDC9 | LZTR1 | 0.68338 | 4 | 0 | 3 |
| CCDC9 | SLC28A1 | 0.68078 | 4 | 0 | 4 |
| CCDC9 | ARR3 | 0.676592 | 5 | 0 | 4 |
| CCDC9 | PSD | 0.67634 | 3 | 0 | 3 |
| CCDC9 | ODF1 | 0.673117 | 4 | 0 | 4 |
| CCDC9 | NEUROD2 | 0.672866 | 5 | 0 | 4 |
| CCDC9 | E2F4 | 0.671629 | 5 | 0 | 4 |
| CCDC9 | BTN1A1 | 0.669516 | 5 | 0 | 5 |
| CCDC9 | CIITA | 0.66871 | 5 | 0 | 4 |
| CCDC9 | GSK3A | 0.667587 | 8 | 0 | 8 |
| CCDC9 | FOXN3-AS2 | 0.667323 | 6 | 0 | 5 |
For details and further investigation, click here
