| Full name: long intergenic non-protein coding RNA 1013 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 6q23.2 | ||
| Entrez ID: 100507254 | HGNC ID: HGNC:48987 | Ensembl Gene: ENSG00000228495 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC01013:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC01013 | 100507254 | 244280_at | 0.0985 | 0.6768 | |
| GSE26886 | LINC01013 | 100507254 | 244280_at | -0.0488 | 0.7254 | |
| GSE45670 | LINC01013 | 100507254 | 244280_at | 0.1246 | 0.1379 | |
| GSE53622 | LINC01013 | 100507254 | 10563 | 0.2658 | 0.0243 | |
| GSE53624 | LINC01013 | 100507254 | 10563 | -0.2893 | 0.0421 | |
| GSE63941 | LINC01013 | 100507254 | 244280_at | 0.0117 | 0.9367 | |
| GSE77861 | LINC01013 | 100507254 | 244280_at | -0.1711 | 0.2457 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by LINC01013 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC01013:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC01013 | 100507254 | 4 | 4 | 22 | |
| GSE20123 | LINC01013 | 100507254 | 4 | 3 | 23 | |
| GSE43470 | LINC01013 | 100507254 | 5 | 0 | 38 | |
| GSE46452 | LINC01013 | 100507254 | 2 | 11 | 46 | |
| GSE47630 | LINC01013 | 100507254 | 9 | 4 | 27 | |
| GSE54993 | LINC01013 | 100507254 | 3 | 2 | 65 | |
| GSE54994 | LINC01013 | 100507254 | 9 | 7 | 37 | |
| GSE60625 | LINC01013 | 100507254 | 0 | 1 | 10 | |
| GSE74703 | LINC01013 | 100507254 | 4 | 0 | 32 | |
| GSE74704 | LINC01013 | 100507254 | 2 | 1 | 17 |
Total number of gains: 42; Total number of losses: 33; Total Number of normals: 317.
Somatic mutations of LINC01013:
Generating mutation plots.
Highly correlated genes for LINC01013:
Showing top 20/48 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC01013 | CD48 | 0.683599 | 3 | 0 | 3 |
| LINC01013 | MAP1LC3C | 0.677707 | 3 | 0 | 3 |
| LINC01013 | KRTAP19-3 | 0.675653 | 3 | 0 | 3 |
| LINC01013 | IL16 | 0.669378 | 3 | 0 | 3 |
| LINC01013 | TMEM156 | 0.668396 | 3 | 0 | 3 |
| LINC01013 | TNP2 | 0.664161 | 3 | 0 | 3 |
| LINC01013 | IL10RA | 0.651271 | 3 | 0 | 3 |
| LINC01013 | CXCR1 | 0.647472 | 3 | 0 | 3 |
| LINC01013 | LINC00280 | 0.646918 | 3 | 0 | 3 |
| LINC01013 | EVI2B | 0.645574 | 3 | 0 | 3 |
| LINC01013 | KCNIP1 | 0.645166 | 3 | 0 | 3 |
| LINC01013 | LCE1B | 0.644298 | 3 | 0 | 3 |
| LINC01013 | SNX20 | 0.63871 | 3 | 0 | 3 |
| LINC01013 | OXT | 0.632394 | 3 | 0 | 3 |
| LINC01013 | CR1 | 0.631046 | 4 | 0 | 4 |
| LINC01013 | HVCN1 | 0.619549 | 3 | 0 | 3 |
| LINC01013 | FCRL5 | 0.618868 | 3 | 0 | 3 |
| LINC01013 | SH2D1A | 0.608359 | 4 | 0 | 4 |
| LINC01013 | BIN2 | 0.607999 | 4 | 0 | 3 |
| LINC01013 | KCNA4 | 0.601827 | 3 | 0 | 3 |
For details and further investigation, click here
