MARK4

 

Full name: microtubule affinity regulating kinase 4 Alias Symbol: Nbla00650|FLJ90097|KIAA1860|PAR-1D
Type: protein-coding gene Cytoband: 19q13.32
Entrez ID: 57787 HGNC ID: HGNC:13538 Ensembl Gene: ENSG00000007047 OMIM ID: 606495
Drug and gene relationship at DGIdb

 

Expression of MARK4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 MARK4 57787 55065_at 0.5164 0.2628
GSE20347 MARK4 57787 55065_at 0.0775 0.5392
GSE23400 MARK4 57787 221560_at 0.0810 0.0960
GSE26886 MARK4 57787 55065_at 0.9283 0.0020
GSE29001 MARK4 57787 55065_at 0.0724 0.9048
GSE38129 MARK4 57787 55065_at 0.0558 0.6574
GSE45670 MARK4 57787 55065_at 0.0110 0.9481
GSE53622 MARK4 57787 21752 -0.1550 0.0050
GSE53624 MARK4 57787 21752 -0.3691 0.0000
GSE63941 MARK4 57787 55065_at -0.2267 0.5545
GSE77861 MARK4 57787 221560_at 0.2710 0.1375
GSE97050 MARK4 57787 A_33_P3322428 0.0725 0.7360
SRP007169 MARK4 57787 RNAseq -0.1711 0.7023
SRP008496 MARK4 57787 RNAseq -0.2000 0.5434
SRP064894 MARK4 57787 RNAseq 0.2277 0.2431
SRP133303 MARK4 57787 RNAseq 0.3719 0.0495
SRP159526 MARK4 57787 RNAseq 0.7983 0.0057
SRP193095 MARK4 57787 RNAseq 0.2372 0.0775
SRP219564 MARK4 57787 RNAseq -0.2625 0.2397
TCGA MARK4 57787 RNAseq 0.0557 0.2503

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by MARK4 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of MARK4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 MARK4 57787 4 5 21
GSE20123 MARK4 57787 4 4 22
GSE43470 MARK4 57787 3 11 29
GSE46452 MARK4 57787 45 1 13
GSE47630 MARK4 57787 8 6 26
GSE54993 MARK4 57787 17 4 49
GSE54994 MARK4 57787 6 12 35
GSE60625 MARK4 57787 9 0 2
GSE74703 MARK4 57787 3 7 26
GSE74704 MARK4 57787 4 2 14
TCGA MARK4 57787 14 18 64

Total number of gains: 117; Total number of losses: 70; Total Number of normals: 301.  


 

Somatic mutations of MARK4:

 

Generating mutation plots.

 

Highly correlated genes for MARK4:

 

Showing top 20/428 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
MARK4CASC150.785778303
MARK4GAK0.76604303
MARK4KRTAP9-60.746882303
MARK4GPR137C0.745368303
MARK4MIRLET7BHG0.742326303
MARK4NAPSA0.738871303
MARK4ERICH40.7338303
MARK4CLDN190.731986303
MARK4NOP580.725522303
MARK4KIR3DL20.725032303
MARK4IGF20.719864303
MARK4CCAR10.719528303
MARK4EVI5L0.717314303
MARK4PTPN230.7087303
MARK4GRINA0.708005403
MARK4KHSRP0.707995606
MARK4ZNF3160.705618504
MARK4ALKBH60.703123403
MARK4LMLN0.701845505
MARK4HOXD130.701654403

For details and further investigation, click here