| Full name: sarcoglycan epsilon | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 7q21.3 | ||
| Entrez ID: 8910 | HGNC ID: HGNC:10808 | Ensembl Gene: ENSG00000127990 | OMIM ID: 604149 |
| Drug and gene relationship at DGIdb | |||
Expression of SGCE:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SGCE | 8910 | 204688_at | -1.2188 | 0.3812 | |
| GSE20347 | SGCE | 8910 | 204688_at | 0.5292 | 0.1360 | |
| GSE23400 | SGCE | 8910 | 204688_at | -0.1384 | 0.4103 | |
| GSE26886 | SGCE | 8910 | 204688_at | 3.0185 | 0.0000 | |
| GSE29001 | SGCE | 8910 | 204688_at | 0.7880 | 0.2640 | |
| GSE38129 | SGCE | 8910 | 204688_at | 0.0070 | 0.9909 | |
| GSE45670 | SGCE | 8910 | 204688_at | -2.0023 | 0.0009 | |
| GSE53622 | SGCE | 8910 | 78742 | -0.2160 | 0.2675 | |
| GSE53624 | SGCE | 8910 | 78742 | 0.0050 | 0.9802 | |
| GSE63941 | SGCE | 8910 | 204688_at | -2.2136 | 0.3049 | |
| GSE77861 | SGCE | 8910 | 204688_at | 1.4566 | 0.0332 | |
| GSE97050 | SGCE | 8910 | A_33_P3229617 | -0.3301 | 0.2328 | |
| SRP007169 | SGCE | 8910 | RNAseq | 3.7670 | 0.0000 | |
| SRP008496 | SGCE | 8910 | RNAseq | 3.9993 | 0.0000 | |
| SRP064894 | SGCE | 8910 | RNAseq | 0.0997 | 0.7576 | |
| SRP133303 | SGCE | 8910 | RNAseq | -0.1015 | 0.7943 | |
| SRP159526 | SGCE | 8910 | RNAseq | 0.5879 | 0.2279 | |
| SRP193095 | SGCE | 8910 | RNAseq | 1.8142 | 0.0000 | |
| SRP219564 | SGCE | 8910 | RNAseq | 0.1411 | 0.8624 | |
| TCGA | SGCE | 8910 | RNAseq | -0.2163 | 0.2442 |
Upregulated datasets: 5; Downregulated datasets: 1.
Survival by SGCE expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SGCE:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SGCE | 8910 | 13 | 0 | 17 | |
| GSE20123 | SGCE | 8910 | 13 | 0 | 17 | |
| GSE43470 | SGCE | 8910 | 7 | 3 | 33 | |
| GSE46452 | SGCE | 8910 | 12 | 0 | 47 | |
| GSE47630 | SGCE | 8910 | 8 | 2 | 30 | |
| GSE54993 | SGCE | 8910 | 1 | 9 | 60 | |
| GSE54994 | SGCE | 8910 | 16 | 2 | 35 | |
| GSE60625 | SGCE | 8910 | 0 | 5 | 6 | |
| GSE74703 | SGCE | 8910 | 6 | 2 | 28 | |
| GSE74704 | SGCE | 8910 | 9 | 0 | 11 | |
| TCGA | SGCE | 8910 | 56 | 4 | 36 |
Total number of gains: 141; Total number of losses: 27; Total Number of normals: 320.
Somatic mutations of SGCE:
Generating mutation plots.
Highly correlated genes for SGCE:
Showing top 20/1258 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SGCE | MYADM | 0.803969 | 4 | 0 | 4 |
| SGCE | TCEAL3 | 0.795968 | 3 | 0 | 3 |
| SGCE | RHOJ | 0.794713 | 4 | 0 | 4 |
| SGCE | ZNF827 | 0.792451 | 3 | 0 | 3 |
| SGCE | MPDZ | 0.779228 | 11 | 0 | 11 |
| SGCE | HMCN1 | 0.779092 | 7 | 0 | 7 |
| SGCE | MCAM | 0.776062 | 8 | 0 | 8 |
| SGCE | RAD23A | 0.767457 | 3 | 0 | 3 |
| SGCE | PEG3 | 0.761014 | 5 | 0 | 5 |
| SGCE | MFHAS1 | 0.760814 | 3 | 0 | 3 |
| SGCE | THOC5 | 0.754684 | 3 | 0 | 3 |
| SGCE | RNASE4 | 0.752259 | 6 | 0 | 6 |
| SGCE | TP53I13 | 0.752241 | 3 | 0 | 3 |
| SGCE | LIG3 | 0.748049 | 4 | 0 | 4 |
| SGCE | TUBG2 | 0.747781 | 4 | 0 | 4 |
| SGCE | AXL | 0.742292 | 9 | 0 | 9 |
| SGCE | PDE1A | 0.741964 | 8 | 0 | 8 |
| SGCE | PMP22 | 0.741729 | 13 | 0 | 11 |
| SGCE | DCLK1 | 0.739885 | 6 | 0 | 6 |
| SGCE | DOCK11 | 0.737471 | 5 | 0 | 5 |
For details and further investigation, click here
