| Full name: MGAT4 family member C | Alias Symbol: HGNT-IV-H | ||
| Type: protein-coding gene | Cytoband: 12q21.31-q21.32 | ||
| Entrez ID: 25834 | HGNC ID: HGNC:30871 | Ensembl Gene: ENSG00000182050 | OMIM ID: 607385 |
| Drug and gene relationship at DGIdb | |||
Expression of MGAT4C:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | MGAT4C | 25834 | 207447_s_at | 0.0216 | 0.9307 | |
| GSE20347 | MGAT4C | 25834 | 207447_s_at | -0.0372 | 0.4893 | |
| GSE23400 | MGAT4C | 25834 | 207447_s_at | 0.0013 | 0.9389 | |
| GSE26886 | MGAT4C | 25834 | 207447_s_at | 0.0264 | 0.7751 | |
| GSE29001 | MGAT4C | 25834 | 207447_s_at | -0.0683 | 0.5930 | |
| GSE38129 | MGAT4C | 25834 | 207447_s_at | -0.0381 | 0.6579 | |
| GSE45670 | MGAT4C | 25834 | 207447_s_at | 0.0276 | 0.7370 | |
| GSE53622 | MGAT4C | 25834 | 65674 | -0.4441 | 0.0001 | |
| GSE53624 | MGAT4C | 25834 | 65674 | -0.1793 | 0.0867 | |
| GSE63941 | MGAT4C | 25834 | 207447_s_at | 0.1117 | 0.7485 | |
| GSE77861 | MGAT4C | 25834 | 207447_s_at | 0.0953 | 0.2702 | |
| SRP007169 | MGAT4C | 25834 | RNAseq | 0.6073 | 0.4185 | |
| SRP064894 | MGAT4C | 25834 | RNAseq | -0.8886 | 0.0079 | |
| SRP133303 | MGAT4C | 25834 | RNAseq | 0.2796 | 0.2448 | |
| SRP159526 | MGAT4C | 25834 | RNAseq | -0.6430 | 0.1705 | |
| SRP193095 | MGAT4C | 25834 | RNAseq | 0.5499 | 0.0036 | |
| SRP219564 | MGAT4C | 25834 | RNAseq | 0.0978 | 0.8851 | |
| TCGA | MGAT4C | 25834 | RNAseq | -0.4801 | 0.5687 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by MGAT4C expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of MGAT4C:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | MGAT4C | 25834 | 3 | 3 | 24 | |
| GSE20123 | MGAT4C | 25834 | 3 | 3 | 24 | |
| GSE43470 | MGAT4C | 25834 | 3 | 1 | 39 | |
| GSE46452 | MGAT4C | 25834 | 9 | 1 | 49 | |
| GSE47630 | MGAT4C | 25834 | 10 | 1 | 29 | |
| GSE54993 | MGAT4C | 25834 | 0 | 6 | 64 | |
| GSE54994 | MGAT4C | 25834 | 7 | 1 | 45 | |
| GSE60625 | MGAT4C | 25834 | 0 | 0 | 11 | |
| GSE74703 | MGAT4C | 25834 | 3 | 1 | 32 | |
| GSE74704 | MGAT4C | 25834 | 1 | 3 | 16 | |
| TCGA | MGAT4C | 25834 | 19 | 10 | 67 |
Total number of gains: 58; Total number of losses: 30; Total Number of normals: 400.
Somatic mutations of MGAT4C:
Generating mutation plots.
Highly correlated genes for MGAT4C:
Showing top 20/30 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| MGAT4C | NELL1 | 0.748379 | 3 | 0 | 3 |
| MGAT4C | PROX1 | 0.732215 | 3 | 0 | 3 |
| MGAT4C | KHDRBS2 | 0.716242 | 3 | 0 | 3 |
| MGAT4C | IL3RA | 0.670585 | 3 | 0 | 3 |
| MGAT4C | IGK | 0.661345 | 3 | 0 | 3 |
| MGAT4C | CDH7 | 0.649746 | 3 | 0 | 3 |
| MGAT4C | ATP2A3 | 0.647405 | 3 | 0 | 3 |
| MGAT4C | HAPLN1 | 0.647274 | 3 | 0 | 3 |
| MGAT4C | CHGB | 0.634857 | 3 | 0 | 3 |
| MGAT4C | SUPT6H | 0.634614 | 3 | 0 | 3 |
| MGAT4C | PPP2R5B | 0.630391 | 4 | 0 | 4 |
| MGAT4C | SYT13 | 0.625545 | 3 | 0 | 3 |
| MGAT4C | RPL3L | 0.61828 | 3 | 0 | 3 |
| MGAT4C | PEX5L | 0.615376 | 4 | 0 | 3 |
| MGAT4C | GDI1 | 0.60755 | 3 | 0 | 3 |
| MGAT4C | SPTAN1 | 0.603223 | 4 | 0 | 3 |
| MGAT4C | CALCB | 0.600228 | 5 | 0 | 3 |
| MGAT4C | STX1A | 0.595077 | 3 | 0 | 3 |
| MGAT4C | EMC10 | 0.583552 | 4 | 0 | 3 |
| MGAT4C | ANKRD26 | 0.580472 | 3 | 0 | 3 |
For details and further investigation, click here
