| Full name: calcitonin related polypeptide beta | Alias Symbol: FLJ30166|CGRP-II | ||
| Type: protein-coding gene | Cytoband: 11p15.2 | ||
| Entrez ID: 797 | HGNC ID: HGNC:1438 | Ensembl Gene: ENSG00000175868 | OMIM ID: 114160 |
| Drug and gene relationship at DGIdb | |||
Expression of CALCB:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CALCB | 797 | 214636_at | 0.1112 | 0.6894 | |
| GSE20347 | CALCB | 797 | 214636_at | 0.0480 | 0.5176 | |
| GSE23400 | CALCB | 797 | 214636_at | -0.1171 | 0.0008 | |
| GSE26886 | CALCB | 797 | 214636_at | 0.0098 | 0.9512 | |
| GSE29001 | CALCB | 797 | 214636_at | -0.0675 | 0.6344 | |
| GSE38129 | CALCB | 797 | 214636_at | 0.0347 | 0.6883 | |
| GSE45670 | CALCB | 797 | 214636_at | 0.2763 | 0.1434 | |
| GSE53622 | CALCB | 797 | 51875 | -0.2707 | 0.0004 | |
| GSE53624 | CALCB | 797 | 51875 | -0.0566 | 0.5434 | |
| GSE63941 | CALCB | 797 | 214636_at | 0.3194 | 0.6745 | |
| GSE77861 | CALCB | 797 | 214636_at | 0.0582 | 0.5288 | |
| TCGA | CALCB | 797 | RNAseq | 1.0998 | 0.3100 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by CALCB expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CALCB:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CALCB | 797 | 1 | 10 | 19 | |
| GSE20123 | CALCB | 797 | 1 | 10 | 19 | |
| GSE43470 | CALCB | 797 | 1 | 5 | 37 | |
| GSE46452 | CALCB | 797 | 7 | 5 | 47 | |
| GSE47630 | CALCB | 797 | 3 | 11 | 26 | |
| GSE54993 | CALCB | 797 | 3 | 0 | 67 | |
| GSE54994 | CALCB | 797 | 4 | 12 | 37 | |
| GSE60625 | CALCB | 797 | 0 | 0 | 11 | |
| GSE74703 | CALCB | 797 | 1 | 3 | 32 | |
| GSE74704 | CALCB | 797 | 0 | 9 | 11 | |
| TCGA | CALCB | 797 | 11 | 31 | 54 |
Total number of gains: 32; Total number of losses: 96; Total Number of normals: 360.
Somatic mutations of CALCB:
Generating mutation plots.
Highly correlated genes for CALCB:
Showing top 20/268 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CALCB | SERPIND1 | 0.765605 | 3 | 0 | 3 |
| CALCB | COL4A3 | 0.748533 | 3 | 0 | 3 |
| CALCB | MAGEA8 | 0.731642 | 4 | 0 | 4 |
| CALCB | SLC6A5 | 0.716959 | 3 | 0 | 3 |
| CALCB | IL19 | 0.704694 | 4 | 0 | 4 |
| CALCB | DPF3 | 0.695896 | 3 | 0 | 3 |
| CALCB | CST8 | 0.688052 | 3 | 0 | 3 |
| CALCB | SLC45A2 | 0.68171 | 4 | 0 | 4 |
| CALCB | DNMT3L | 0.681112 | 3 | 0 | 3 |
| CALCB | ANXA13 | 0.675618 | 3 | 0 | 3 |
| CALCB | TUB | 0.665902 | 3 | 0 | 3 |
| CALCB | CRX | 0.664558 | 3 | 0 | 3 |
| CALCB | PRR34 | 0.661604 | 3 | 0 | 3 |
| CALCB | ECEL1 | 0.661427 | 4 | 0 | 3 |
| CALCB | CPS1-IT1 | 0.660101 | 4 | 0 | 3 |
| CALCB | PTGIR | 0.659758 | 3 | 0 | 3 |
| CALCB | STXBP5L | 0.654229 | 3 | 0 | 3 |
| CALCB | TMPRSS5 | 0.653904 | 5 | 0 | 4 |
| CALCB | OBSL1 | 0.652656 | 4 | 0 | 3 |
| CALCB | GPR35 | 0.650772 | 4 | 0 | 3 |
For details and further investigation, click here
