MMP21

 

Full name: matrix metallopeptidase 21 Alias Symbol: 
Type: protein-coding gene Cytoband: 10q26.2
Entrez ID: 118856 HGNC ID: HGNC:14357 Ensembl Gene: ENSG00000154485 OMIM ID: 608416
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of MMP21:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 MMP21 118856 1552592_at -0.0790 0.7089
GSE26886 MMP21 118856 1552592_at 0.0427 0.5675
GSE45670 MMP21 118856 1552592_at 0.0256 0.7609
GSE53622 MMP21 118856 26607 -0.1571 0.1922
GSE53624 MMP21 118856 26607 -0.0647 0.3681
GSE63941 MMP21 118856 1552592_at -0.0829 0.4327
GSE77861 MMP21 118856 1552592_at 0.0670 0.4163
GSE97050 MMP21 118856 A_23_P24211 -0.3408 0.2575
TCGA MMP21 118856 RNAseq -2.4828 0.0001

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by MMP21 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of MMP21:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 MMP21 118856 2 6 22
GSE20123 MMP21 118856 2 6 22
GSE43470 MMP21 118856 0 10 33
GSE46452 MMP21 118856 0 11 48
GSE47630 MMP21 118856 2 14 24
GSE54993 MMP21 118856 8 1 61
GSE54994 MMP21 118856 1 9 43
GSE60625 MMP21 118856 0 0 11
GSE74703 MMP21 118856 0 6 30
GSE74704 MMP21 118856 2 2 16
TCGA MMP21 118856 7 27 62

Total number of gains: 24; Total number of losses: 92; Total Number of normals: 372.  


 

Somatic mutations of MMP21:

 

Generating mutation plots.

 

Highly correlated genes for MMP21:

 

Showing top 20/95 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
MMP21KCNF10.771713303
MMP21OR2D20.76613303
MMP21FHAD10.759998303
MMP21TRIM100.730123404
MMP21TDRD10.725078303
MMP21SMCP0.717235303
MMP21PTPRR0.716148303
MMP21PNLIPRP10.713304303
MMP21PRAMEF50.711288303
MMP21HRC0.711022403
MMP21ZNF6670.703579303
MMP21BTNL20.703517303
MMP21C20orf1730.703137303
MMP21NXNL10.699433303
MMP21OR2B110.698183303
MMP21LYZL20.697462303
MMP21INSC0.696385404
MMP21OR4A150.689416303
MMP21FSCN30.688529303
MMP21POLL0.683911303

For details and further investigation, click here