NEUROD2

 

Full name: neuronal differentiation 2 Alias Symbol: NDRF|bHLHa1
Type: protein-coding gene Cytoband: 17q12
Entrez ID: 4761 HGNC ID: HGNC:7763 Ensembl Gene: ENSG00000171532 OMIM ID: 601725
Drug and gene relationship at DGIdb

 

Expression of NEUROD2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 NEUROD2 4761 1552953_a_at 0.0729 0.7843
GSE20347 NEUROD2 4761 210271_at 0.1820 0.0993
GSE23400 NEUROD2 4761 210271_at -0.1262 0.0133
GSE26886 NEUROD2 4761 210271_at 0.3731 0.0057
GSE29001 NEUROD2 4761 210271_at 0.0009 0.9957
GSE38129 NEUROD2 4761 210271_at 0.1145 0.2359
GSE45670 NEUROD2 4761 1552953_a_at 0.1273 0.1302
GSE63941 NEUROD2 4761 1552953_a_at -0.0540 0.7951
GSE77861 NEUROD2 4761 1552953_a_at -0.0245 0.8097
SRP133303 NEUROD2 4761 RNAseq 0.4011 0.2044
SRP159526 NEUROD2 4761 RNAseq -0.5993 0.5784
SRP193095 NEUROD2 4761 RNAseq -0.1486 0.4225
SRP219564 NEUROD2 4761 RNAseq 0.4820 0.3859
TCGA NEUROD2 4761 RNAseq -0.5557 0.5406

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by NEUROD2 expression:

 

TCGA

 

Note: Click image to view full size file.  


Copy number change of NEUROD2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 NEUROD2 4761 8 1 21
GSE20123 NEUROD2 4761 8 1 21
GSE43470 NEUROD2 4761 1 1 41
GSE46452 NEUROD2 4761 34 0 25
GSE47630 NEUROD2 4761 8 1 31
GSE54993 NEUROD2 4761 3 4 63
GSE54994 NEUROD2 4761 8 5 40
GSE60625 NEUROD2 4761 4 0 7
GSE74703 NEUROD2 4761 1 0 35
GSE74704 NEUROD2 4761 5 1 14
TCGA NEUROD2 4761 23 8 65

Total number of gains: 103; Total number of losses: 22; Total Number of normals: 363.  


 

Somatic mutations of NEUROD2:

 

Generating mutation plots.

 

Highly correlated genes for NEUROD2:

 

Showing top 20/662 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
NEUROD2SYT130.759103303
NEUROD2ADAM220.75536404
NEUROD2CHAT0.753089404
NEUROD2FOLH10.750191404
NEUROD2NTNG10.745242404
NEUROD2MC2R0.743245404
NEUROD2SRPK30.740677303
NEUROD2PAPPA20.736879404
NEUROD2JAK30.736058404
NEUROD2WRNIP10.733266404
NEUROD2LENEP0.730681505
NEUROD2RFPL20.723794404
NEUROD2GPA330.72335404
NEUROD2EDA2R0.721516404
NEUROD2CYP3A40.717761505
NEUROD2GML0.71775505
NEUROD2DCSTAMP0.717655404
NEUROD2NPY5R0.717162303
NEUROD2TM4SF40.716954303
NEUROD2CBL0.711273505

For details and further investigation, click here