NHLH1

 

Full name: nescient helix-loop-helix 1 Alias Symbol: NSCL|NSCL1|bHLHa35
Type: protein-coding gene Cytoband: 1q23.2
Entrez ID: 4807 HGNC ID: HGNC:7817 Ensembl Gene: ENSG00000171786 OMIM ID: 162360
Drug and gene relationship at DGIdb

 

Expression of NHLH1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 NHLH1 4807 214628_at 0.0870 0.7847
GSE20347 NHLH1 4807 214628_at 0.1814 0.0889
GSE23400 NHLH1 4807 214628_at 0.0090 0.8161
GSE26886 NHLH1 4807 214628_at 0.0792 0.4937
GSE29001 NHLH1 4807 214628_at -0.0905 0.6896
GSE38129 NHLH1 4807 214628_at 0.0308 0.8062
GSE45670 NHLH1 4807 214628_at 0.2423 0.1508
GSE53622 NHLH1 4807 49878 -0.1779 0.0970
GSE53624 NHLH1 4807 49878 -0.0511 0.6015
GSE63941 NHLH1 4807 214628_at 0.2200 0.1895
GSE77861 NHLH1 4807 214628_at 0.0396 0.7614
GSE97050 NHLH1 4807 A_24_P336474 0.0740 0.7778
TCGA NHLH1 4807 RNAseq 0.6955 0.0116

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by NHLH1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of NHLH1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 NHLH1 4807 10 0 20
GSE20123 NHLH1 4807 10 0 20
GSE43470 NHLH1 4807 7 2 34
GSE46452 NHLH1 4807 2 1 56
GSE47630 NHLH1 4807 14 0 26
GSE54993 NHLH1 4807 0 5 65
GSE54994 NHLH1 4807 16 0 37
GSE60625 NHLH1 4807 0 0 11
GSE74703 NHLH1 4807 7 2 27
GSE74704 NHLH1 4807 4 0 16
TCGA NHLH1 4807 44 3 49

Total number of gains: 114; Total number of losses: 13; Total Number of normals: 361.  


 

Somatic mutations of NHLH1:

 

Generating mutation plots.

 

Highly correlated genes for NHLH1:

 

Showing top 20/680 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
NHLH1PRLR0.766656404
NHLH1USP340.737429303
NHLH1TAOK20.735331303
NHLH1IGH0.720111303
NHLH1LINC013610.717674303
NHLH1RAMP20.716425303
NHLH1POU3F40.706621505
NHLH1MC2R0.706157504
NHLH1KRT840.703419303
NHLH1PAPPA20.700128403
NHLH1HAO20.693965404
NHLH1GAD20.690813404
NHLH1USP50.686076404
NHLH1GABRG20.685677303
NHLH1NXPE40.685648403
NHLH1MAPK8IP30.679596505
NHLH1SLC45A20.679218303
NHLH1TBR10.678237505
NHLH1RET0.674806303
NHLH1OR52A10.671522403

For details and further investigation, click here