NMNAT3

 

Full name: nicotinamide nucleotide adenylyltransferase 3 Alias Symbol: PNAT3
Type: protein-coding gene Cytoband: 3q23
Entrez ID: 349565 HGNC ID: HGNC:20989 Ensembl Gene: ENSG00000163864 OMIM ID: 608702
Drug and gene relationship at DGIdb

 

Expression of NMNAT3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 NMNAT3 349565 228090_at 0.9136 0.2906
GSE26886 NMNAT3 349565 228090_at 1.2720 0.0001
GSE45670 NMNAT3 349565 228090_at 0.6198 0.0488
GSE53622 NMNAT3 349565 7508 0.6382 0.0000
GSE53624 NMNAT3 349565 7508 0.8500 0.0000
GSE63941 NMNAT3 349565 228090_at 2.0041 0.0532
GSE77861 NMNAT3 349565 243738_at 0.0380 0.8714
GSE97050 NMNAT3 349565 A_24_P260134 0.2033 0.7127
SRP007169 NMNAT3 349565 RNAseq 1.8738 0.0004
SRP008496 NMNAT3 349565 RNAseq 2.3490 0.0000
SRP064894 NMNAT3 349565 RNAseq 0.4975 0.0546
SRP133303 NMNAT3 349565 RNAseq 0.6687 0.0001
SRP159526 NMNAT3 349565 RNAseq 1.3850 0.0028
SRP193095 NMNAT3 349565 RNAseq 1.3246 0.0000
SRP219564 NMNAT3 349565 RNAseq 0.1653 0.8486
TCGA NMNAT3 349565 RNAseq 0.1839 0.2600

Upregulated datasets: 5; Downregulated datasets: 0.  


 

Survival by NMNAT3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of NMNAT3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 NMNAT3 349565 18 0 12
GSE20123 NMNAT3 349565 18 0 12
GSE43470 NMNAT3 349565 22 0 21
GSE46452 NMNAT3 349565 15 4 40
GSE47630 NMNAT3 349565 19 3 18
GSE54993 NMNAT3 349565 2 8 60
GSE54994 NMNAT3 349565 32 2 19
GSE60625 NMNAT3 349565 0 6 5
GSE74703 NMNAT3 349565 19 0 17
GSE74704 NMNAT3 349565 12 0 8
TCGA NMNAT3 349565 61 4 31

Total number of gains: 218; Total number of losses: 27; Total Number of normals: 243.  


 

Somatic mutations of NMNAT3:

 

Generating mutation plots.

 

Highly correlated genes for NMNAT3:

 

Showing top 20/241 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
NMNAT3PODXL20.739743303
NMNAT3LSM100.725446303
NMNAT3PQBP10.722116404
NMNAT3SULT1A10.690474303
NMNAT3ZNF6700.688596303
NMNAT3CUX10.681316303
NMNAT3CCNB1IP10.677627303
NMNAT3COMMD20.663312303
NMNAT3MSLN0.662863303
NMNAT3DNAJC190.660968403
NMNAT3RASEF0.656853303
NMNAT3HPS30.65495303
NMNAT3ZC3HAV1L0.65168303
NMNAT3FADD0.649594303
NMNAT3ZHX20.647581403
NMNAT3URI10.643178303
NMNAT3CHKA0.64127303
NMNAT3ALG10.640592303
NMNAT3RANGRF0.638289303
NMNAT3TIMM90.635413404

For details and further investigation, click here