| Full name: outer dense fiber of sperm tails 3 | Alias Symbol: SHIPPO1|hSHIPPO|CT135 | ||
| Type: protein-coding gene | Cytoband: 11p15.5 | ||
| Entrez ID: 113746 | HGNC ID: HGNC:19905 | Ensembl Gene: ENSG00000177947 | OMIM ID: 608356 |
| Drug and gene relationship at DGIdb | |||
Expression of ODF3:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | ODF3 | 113746 | 233795_at | 0.1285 | 0.5395 | |
| GSE26886 | ODF3 | 113746 | 233795_at | 0.1738 | 0.1542 | |
| GSE45670 | ODF3 | 113746 | 233795_at | 0.2530 | 0.0111 | |
| GSE53622 | ODF3 | 113746 | 40149 | -0.7190 | 0.0000 | |
| GSE53624 | ODF3 | 113746 | 40149 | -1.1144 | 0.0000 | |
| GSE63941 | ODF3 | 113746 | 233795_at | 0.1036 | 0.4946 | |
| GSE77861 | ODF3 | 113746 | 233795_at | 0.0744 | 0.6074 | |
| GSE97050 | ODF3 | 113746 | A_33_P3219146 | -0.2392 | 0.3427 | |
| TCGA | ODF3 | 113746 | RNAseq | -0.1670 | 0.8496 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by ODF3 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of ODF3:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | ODF3 | 113746 | 1 | 11 | 18 | |
| GSE20123 | ODF3 | 113746 | 1 | 12 | 17 | |
| GSE43470 | ODF3 | 113746 | 1 | 11 | 31 | |
| GSE46452 | ODF3 | 113746 | 7 | 8 | 44 | |
| GSE47630 | ODF3 | 113746 | 4 | 12 | 24 | |
| GSE54993 | ODF3 | 113746 | 3 | 2 | 65 | |
| GSE54994 | ODF3 | 113746 | 1 | 12 | 40 | |
| GSE60625 | ODF3 | 113746 | 0 | 0 | 11 | |
| GSE74703 | ODF3 | 113746 | 1 | 9 | 26 | |
| GSE74704 | ODF3 | 113746 | 0 | 8 | 12 | |
| TCGA | ODF3 | 113746 | 8 | 38 | 50 |
Total number of gains: 27; Total number of losses: 123; Total Number of normals: 338.
Somatic mutations of ODF3:
Generating mutation plots.
Highly correlated genes for ODF3:
Showing top 20/98 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| ODF3 | KRTAP20-1 | 0.722417 | 3 | 0 | 3 |
| ODF3 | FAM163B | 0.719895 | 3 | 0 | 3 |
| ODF3 | MFSD2B | 0.712344 | 3 | 0 | 3 |
| ODF3 | KRTAP6-1 | 0.696868 | 3 | 0 | 3 |
| ODF3 | NANOS2 | 0.694207 | 3 | 0 | 3 |
| ODF3 | NCR3 | 0.685116 | 3 | 0 | 3 |
| ODF3 | CD164L2 | 0.681445 | 3 | 0 | 3 |
| ODF3 | EVX1 | 0.680712 | 3 | 0 | 3 |
| ODF3 | CLDN14 | 0.674929 | 3 | 0 | 3 |
| ODF3 | OR13G1 | 0.672699 | 3 | 0 | 3 |
| ODF3 | OTOP3 | 0.671867 | 3 | 0 | 3 |
| ODF3 | OR51T1 | 0.667586 | 3 | 0 | 3 |
| ODF3 | TEN1 | 0.66728 | 3 | 0 | 3 |
| ODF3 | KRTAP4-1 | 0.66646 | 4 | 0 | 3 |
| ODF3 | OR2Z1 | 0.661876 | 3 | 0 | 3 |
| ODF3 | GABRR3 | 0.656596 | 3 | 0 | 3 |
| ODF3 | BARHL2 | 0.656354 | 3 | 0 | 3 |
| ODF3 | TEKT2 | 0.655634 | 3 | 0 | 3 |
| ODF3 | PCDH1 | 0.654716 | 3 | 0 | 3 |
| ODF3 | NCR1 | 0.650467 | 3 | 0 | 3 |
For details and further investigation, click here
