| Full name: peptidase domain containing associated with muscle regeneration 1 | Alias Symbol: RAMP|DKFZP586H2123 | ||
| Type: protein-coding gene | Cytoband: 11p13 | ||
| Entrez ID: 25891 | HGNC ID: HGNC:24554 | Ensembl Gene: ENSG00000149090 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of PAMR1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | PAMR1 | 25891 | 213661_at | -0.8259 | 0.3198 | |
| GSE20347 | PAMR1 | 25891 | 213661_at | 0.1385 | 0.3944 | |
| GSE23400 | PAMR1 | 25891 | 213661_at | -0.2210 | 0.0005 | |
| GSE26886 | PAMR1 | 25891 | 213661_at | 0.7716 | 0.0638 | |
| GSE29001 | PAMR1 | 25891 | 213661_at | -0.1242 | 0.7555 | |
| GSE38129 | PAMR1 | 25891 | 213661_at | -0.3453 | 0.1105 | |
| GSE45670 | PAMR1 | 25891 | 213661_at | -0.9527 | 0.0073 | |
| GSE53622 | PAMR1 | 25891 | 24668 | -0.5146 | 0.0034 | |
| GSE53624 | PAMR1 | 25891 | 24668 | -0.6244 | 0.0006 | |
| GSE63941 | PAMR1 | 25891 | 213661_at | -6.2078 | 0.0000 | |
| GSE77861 | PAMR1 | 25891 | 213661_at | 0.3589 | 0.4507 | |
| GSE97050 | PAMR1 | 25891 | A_23_P127911 | -0.6298 | 0.2874 | |
| SRP007169 | PAMR1 | 25891 | RNAseq | 2.3819 | 0.0296 | |
| SRP064894 | PAMR1 | 25891 | RNAseq | -1.0126 | 0.0031 | |
| SRP133303 | PAMR1 | 25891 | RNAseq | -0.9572 | 0.0006 | |
| SRP159526 | PAMR1 | 25891 | RNAseq | 0.2019 | 0.7533 | |
| SRP193095 | PAMR1 | 25891 | RNAseq | 0.9290 | 0.0028 | |
| SRP219564 | PAMR1 | 25891 | RNAseq | -0.3603 | 0.6251 | |
| TCGA | PAMR1 | 25891 | RNAseq | -0.6159 | 0.0017 |
Upregulated datasets: 1; Downregulated datasets: 2.
Survival by PAMR1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of PAMR1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | PAMR1 | 25891 | 1 | 6 | 23 | |
| GSE20123 | PAMR1 | 25891 | 1 | 5 | 24 | |
| GSE43470 | PAMR1 | 25891 | 3 | 4 | 36 | |
| GSE46452 | PAMR1 | 25891 | 7 | 5 | 47 | |
| GSE47630 | PAMR1 | 25891 | 3 | 10 | 27 | |
| GSE54993 | PAMR1 | 25891 | 3 | 2 | 65 | |
| GSE54994 | PAMR1 | 25891 | 3 | 10 | 40 | |
| GSE60625 | PAMR1 | 25891 | 0 | 0 | 11 | |
| GSE74703 | PAMR1 | 25891 | 2 | 2 | 32 | |
| GSE74704 | PAMR1 | 25891 | 0 | 3 | 17 | |
| TCGA | PAMR1 | 25891 | 13 | 23 | 60 |
Total number of gains: 36; Total number of losses: 70; Total Number of normals: 382.
Somatic mutations of PAMR1:
Generating mutation plots.
Highly correlated genes for PAMR1:
Showing top 20/959 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| PAMR1 | FIBIN | 0.839038 | 4 | 0 | 4 |
| PAMR1 | DNAJC18 | 0.770909 | 3 | 0 | 3 |
| PAMR1 | RASD2 | 0.759438 | 3 | 0 | 3 |
| PAMR1 | ZNF583 | 0.759152 | 3 | 0 | 3 |
| PAMR1 | STARD9 | 0.7536 | 4 | 0 | 4 |
| PAMR1 | GALNT15 | 0.753152 | 5 | 0 | 4 |
| PAMR1 | ABCC1 | 0.752981 | 3 | 0 | 3 |
| PAMR1 | TBX5-AS1 | 0.749556 | 4 | 0 | 4 |
| PAMR1 | CHST14 | 0.73253 | 3 | 0 | 3 |
| PAMR1 | CDS2 | 0.72924 | 3 | 0 | 3 |
| PAMR1 | PEG3 | 0.723486 | 6 | 0 | 6 |
| PAMR1 | FBN1 | 0.72117 | 6 | 0 | 5 |
| PAMR1 | DSEL | 0.720409 | 5 | 0 | 5 |
| PAMR1 | FILIP1 | 0.716464 | 4 | 0 | 4 |
| PAMR1 | MED29 | 0.714883 | 3 | 0 | 3 |
| PAMR1 | AP3B2 | 0.714218 | 3 | 0 | 3 |
| PAMR1 | PYROXD2 | 0.710259 | 3 | 0 | 3 |
| PAMR1 | MGARP | 0.707626 | 3 | 0 | 3 |
| PAMR1 | SGTB | 0.707617 | 5 | 0 | 5 |
| PAMR1 | PID1 | 0.706247 | 8 | 0 | 7 |
For details and further investigation, click here
