ABCC1

 

Full name: ATP binding cassette subfamily C member 1 Alias Symbol: GS-X
Type: protein-coding gene Cytoband: 16p13.11
Entrez ID: 4363 HGNC ID: HGNC:51 Ensembl Gene: ENSG00000103222 OMIM ID: 158343
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of ABCC1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ABCC1 4363 202804_at 0.6658 0.4184
GSE20347 ABCC1 4363 202804_at 0.7885 0.0050
GSE23400 ABCC1 4363 202804_at 0.5982 0.0000
GSE26886 ABCC1 4363 202804_at 1.8129 0.0000
GSE29001 ABCC1 4363 202804_at 0.4894 0.1365
GSE38129 ABCC1 4363 202804_at 0.8696 0.0003
GSE45670 ABCC1 4363 202804_at 0.3557 0.3915
GSE53622 ABCC1 4363 23592 0.6744 0.0000
GSE53624 ABCC1 4363 23592 0.8149 0.0000
GSE63941 ABCC1 4363 202804_at -1.5160 0.0014
GSE77861 ABCC1 4363 202804_at 1.6492 0.0032
GSE97050 ABCC1 4363 A_24_P227831 -0.1569 0.6847
SRP007169 ABCC1 4363 RNAseq 0.9392 0.0159
SRP008496 ABCC1 4363 RNAseq 1.1912 0.0007
SRP064894 ABCC1 4363 RNAseq -0.0061 0.9797
SRP133303 ABCC1 4363 RNAseq 0.5354 0.0006
SRP159526 ABCC1 4363 RNAseq 2.0124 0.0000
SRP193095 ABCC1 4363 RNAseq 1.1025 0.0000
SRP219564 ABCC1 4363 RNAseq 0.4594 0.3382
TCGA ABCC1 4363 RNAseq 0.2534 0.0029

Upregulated datasets: 5; Downregulated datasets: 1.  


 

Survival by ABCC1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ABCC1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ABCC1 4363 5 4 21
GSE20123 ABCC1 4363 5 3 22
GSE43470 ABCC1 4363 3 3 37
GSE46452 ABCC1 4363 38 1 20
GSE47630 ABCC1 4363 11 6 23
GSE54993 ABCC1 4363 3 5 62
GSE54994 ABCC1 4363 4 10 39
GSE60625 ABCC1 4363 4 1 6
GSE74703 ABCC1 4363 3 2 31
GSE74704 ABCC1 4363 2 1 17
TCGA ABCC1 4363 20 12 64

Total number of gains: 98; Total number of losses: 48; Total Number of normals: 342.  


 

Somatic mutations of ABCC1:

 

Generating mutation plots.

 

Highly correlated genes for ABCC1:

 

Showing top 20/795 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ABCC1CLIP30.79445303
ABCC1PLEKHA30.781744303
ABCC1FOXF10.760095303
ABCC1AP2B10.756906303
ABCC1PAMR10.752981303
ABCC1TXNRD10.747113013
ABCC1SGTB0.744655404
ABCC1FAM89B0.744209303
ABCC1SMCR80.738863303
ABCC1MSTO10.734625303
ABCC1GLI20.73341311011
ABCC1CD440.731814404
ABCC1FOXN30.713829303
ABCC1ZNF5670.713391303
ABCC1MRPS50.711249303
ABCC1FAM20C0.710718303
ABCC1PIEZO10.709814303
ABCC1DLX6-AS10.708492404
ABCC1RHOBTB20.708335303
ABCC1A1BG0.705946303

For details and further investigation, click here