| Full name: TBX5 antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 12q24.21 | ||
| Entrez ID: 255480 | HGNC ID: HGNC:27402 | Ensembl Gene: ENSG00000255399 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of TBX5-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TBX5-AS1 | 255480 | 239919_at | -0.4464 | 0.4364 | |
| GSE26886 | TBX5-AS1 | 255480 | 239919_at | 0.3114 | 0.0313 | |
| GSE45670 | TBX5-AS1 | 255480 | 239919_at | -0.9249 | 0.0000 | |
| GSE53622 | TBX5-AS1 | 255480 | 115061 | -0.0688 | 0.7853 | |
| GSE53624 | TBX5-AS1 | 255480 | 115061 | 0.3925 | 0.0023 | |
| GSE63941 | TBX5-AS1 | 255480 | 239919_at | -4.4832 | 0.0000 | |
| GSE77861 | TBX5-AS1 | 255480 | 233947_s_at | -0.0151 | 0.8883 | |
| SRP064894 | TBX5-AS1 | 255480 | RNAseq | 0.1654 | 0.6716 | |
| SRP133303 | TBX5-AS1 | 255480 | RNAseq | 0.0557 | 0.8918 | |
| SRP159526 | TBX5-AS1 | 255480 | RNAseq | 0.2066 | 0.6968 | |
| SRP219564 | TBX5-AS1 | 255480 | RNAseq | -0.2321 | 0.8235 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by TBX5-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of TBX5-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TBX5-AS1 | 255480 | 4 | 3 | 23 | |
| GSE20123 | TBX5-AS1 | 255480 | 4 | 3 | 23 | |
| GSE43470 | TBX5-AS1 | 255480 | 2 | 0 | 41 | |
| GSE46452 | TBX5-AS1 | 255480 | 9 | 1 | 49 | |
| GSE47630 | TBX5-AS1 | 255480 | 9 | 3 | 28 | |
| GSE54993 | TBX5-AS1 | 255480 | 0 | 5 | 65 | |
| GSE54994 | TBX5-AS1 | 255480 | 6 | 5 | 42 | |
| GSE60625 | TBX5-AS1 | 255480 | 0 | 0 | 11 | |
| GSE74703 | TBX5-AS1 | 255480 | 2 | 0 | 34 | |
| GSE74704 | TBX5-AS1 | 255480 | 2 | 2 | 16 |
Total number of gains: 38; Total number of losses: 22; Total Number of normals: 332.
Somatic mutations of TBX5-AS1:
Generating mutation plots.
Highly correlated genes for TBX5-AS1:
Showing top 20/540 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TBX5-AS1 | GFRA1 | 0.860221 | 3 | 0 | 3 |
| TBX5-AS1 | MGARP | 0.853271 | 3 | 0 | 3 |
| TBX5-AS1 | RCAN2 | 0.852307 | 3 | 0 | 3 |
| TBX5-AS1 | CNTN3 | 0.835337 | 3 | 0 | 3 |
| TBX5-AS1 | PEG3 | 0.809786 | 3 | 0 | 3 |
| TBX5-AS1 | PCDH9 | 0.806876 | 4 | 0 | 4 |
| TBX5-AS1 | TIMP3 | 0.804535 | 3 | 0 | 3 |
| TBX5-AS1 | SGCD | 0.80403 | 5 | 0 | 5 |
| TBX5-AS1 | GREM2 | 0.801214 | 3 | 0 | 3 |
| TBX5-AS1 | ITGBL1 | 0.78783 | 4 | 0 | 3 |
| TBX5-AS1 | FYCO1 | 0.786178 | 3 | 0 | 3 |
| TBX5-AS1 | S1PR1 | 0.782909 | 3 | 0 | 3 |
| TBX5-AS1 | NAP1L3 | 0.781057 | 5 | 0 | 5 |
| TBX5-AS1 | MRVI1 | 0.775254 | 4 | 0 | 4 |
| TBX5-AS1 | LDB2 | 0.771734 | 3 | 0 | 3 |
| TBX5-AS1 | TBX5 | 0.770406 | 7 | 0 | 6 |
| TBX5-AS1 | ZBTB47 | 0.766355 | 3 | 0 | 3 |
| TBX5-AS1 | GYPC | 0.760619 | 4 | 0 | 3 |
| TBX5-AS1 | LINC01279 | 0.757339 | 4 | 0 | 4 |
| TBX5-AS1 | PRKG1 | 0.75428 | 5 | 0 | 5 |
For details and further investigation, click here
