| Full name: PARN like, ribonuclease domain containing 1 | Alias Symbol: FLJ40240|dJ195P10.2 | ||
| Type: protein-coding gene | Cytoband: 6q25.3 | ||
| Entrez ID: 154197 | HGNC ID: HGNC:21185 | Ensembl Gene: ENSG00000146453 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of PNLDC1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | PNLDC1 | 154197 | 1564414_a_at | 2.6806 | 0.2059 | |
| GSE26886 | PNLDC1 | 154197 | 1564414_a_at | 0.5151 | 0.2240 | |
| GSE45670 | PNLDC1 | 154197 | 1564414_a_at | 1.0820 | 0.1159 | |
| GSE53622 | PNLDC1 | 154197 | 49324 | 1.5607 | 0.0001 | |
| GSE53624 | PNLDC1 | 154197 | 49324 | 1.2069 | 0.0000 | |
| GSE63941 | PNLDC1 | 154197 | 1564414_a_at | 0.1639 | 0.8228 | |
| GSE77861 | PNLDC1 | 154197 | 1564414_a_at | 0.3554 | 0.5444 | |
| GSE97050 | PNLDC1 | 154197 | A_23_P323243 | 0.6111 | 0.4121 | |
| TCGA | PNLDC1 | 154197 | RNAseq | 3.2368 | 0.0007 |
Upregulated datasets: 3; Downregulated datasets: 0.
Survival by PNLDC1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of PNLDC1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | PNLDC1 | 154197 | 1 | 5 | 24 | |
| GSE20123 | PNLDC1 | 154197 | 1 | 4 | 25 | |
| GSE43470 | PNLDC1 | 154197 | 4 | 0 | 39 | |
| GSE46452 | PNLDC1 | 154197 | 3 | 10 | 46 | |
| GSE47630 | PNLDC1 | 154197 | 9 | 4 | 27 | |
| GSE54993 | PNLDC1 | 154197 | 3 | 2 | 65 | |
| GSE54994 | PNLDC1 | 154197 | 8 | 8 | 37 | |
| GSE60625 | PNLDC1 | 154197 | 0 | 1 | 10 | |
| GSE74703 | PNLDC1 | 154197 | 4 | 0 | 32 | |
| GSE74704 | PNLDC1 | 154197 | 0 | 2 | 18 | |
| TCGA | PNLDC1 | 154197 | 13 | 22 | 61 |
Total number of gains: 46; Total number of losses: 58; Total Number of normals: 384.
Somatic mutations of PNLDC1:
Generating mutation plots.
Highly correlated genes for PNLDC1:
Showing all 19 correlated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| PNLDC1 | PODXL2 | 0.750795 | 3 | 0 | 3 |
| PNLDC1 | SCN2A | 0.725298 | 3 | 0 | 3 |
| PNLDC1 | FABP6 | 0.683738 | 4 | 0 | 4 |
| PNLDC1 | SYCP2 | 0.683351 | 3 | 0 | 3 |
| PNLDC1 | RALY | 0.666008 | 3 | 0 | 3 |
| PNLDC1 | NT5C | 0.661162 | 3 | 0 | 3 |
| PNLDC1 | PDRG1 | 0.658133 | 4 | 0 | 3 |
| PNLDC1 | RNF152 | 0.640223 | 3 | 0 | 3 |
| PNLDC1 | GRIN2D | 0.610825 | 4 | 0 | 3 |
| PNLDC1 | KLHL21 | 0.596991 | 3 | 0 | 3 |
| PNLDC1 | AXIN1 | 0.586399 | 3 | 0 | 3 |
| PNLDC1 | C8orf82 | 0.579411 | 3 | 0 | 3 |
| PNLDC1 | ARHGAP39 | 0.571271 | 4 | 0 | 3 |
| PNLDC1 | KLHL35 | 0.565799 | 6 | 0 | 3 |
| PNLDC1 | FGF11 | 0.528022 | 4 | 0 | 3 |
| PNLDC1 | HSD3B7 | 0.527462 | 4 | 0 | 3 |
| PNLDC1 | ZNF74 | 0.522768 | 4 | 0 | 3 |
| PNLDC1 | CAPN12 | 0.522092 | 4 | 0 | 4 |
| PNLDC1 | RNF44 | 0.50151 | 4 | 0 | 3 |
For details and further investigation, click here
