| Full name: calpain 12 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 19q13.2 | ||
| Entrez ID: 147968 | HGNC ID: HGNC:13249 | Ensembl Gene: ENSG00000182472 | OMIM ID: 608839 |
Expression of CAPN12:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CAPN12 | 147968 | 228705_at | 0.3731 | 0.2211 | |
| GSE26886 | CAPN12 | 147968 | 228705_at | 0.3399 | 0.0134 | |
| GSE45670 | CAPN12 | 147968 | 228705_at | 0.7430 | 0.0084 | |
| GSE63941 | CAPN12 | 147968 | 228705_at | 0.7743 | 0.0652 | |
| GSE77861 | CAPN12 | 147968 | 228705_at | 0.3279 | 0.0422 | |
| GSE97050 | CAPN12 | 147968 | A_24_P79040 | 0.5667 | 0.1756 | |
| SRP064894 | CAPN12 | 147968 | RNAseq | 1.8548 | 0.0000 | |
| SRP133303 | CAPN12 | 147968 | RNAseq | 0.6546 | 0.0355 | |
| SRP159526 | CAPN12 | 147968 | RNAseq | 1.8085 | 0.0002 | |
| SRP193095 | CAPN12 | 147968 | RNAseq | 0.6880 | 0.0006 | |
| SRP219564 | CAPN12 | 147968 | RNAseq | -0.0431 | 0.9486 | |
| TCGA | CAPN12 | 147968 | RNAseq | 0.1436 | 0.2948 |
Upregulated datasets: 2; Downregulated datasets: 0.
Survival by CAPN12 expression:
 |
| TCGA |
Note: Click image to view full size file.
Copy number change of CAPN12:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CAPN12 | 147968 | 7 | 4 | 19 | |
| GSE20123 | CAPN12 | 147968 | 7 | 3 | 20 | |
| GSE43470 | CAPN12 | 147968 | 4 | 10 | 29 | |
| GSE46452 | CAPN12 | 147968 | 47 | 2 | 10 | |
| GSE47630 | CAPN12 | 147968 | 9 | 5 | 26 | |
| GSE54993 | CAPN12 | 147968 | 17 | 3 | 50 | |
| GSE54994 | CAPN12 | 147968 | 6 | 9 | 38 | |
| GSE60625 | CAPN12 | 147968 | 9 | 0 | 2 | |
| GSE74703 | CAPN12 | 147968 | 4 | 6 | 26 | |
| GSE74704 | CAPN12 | 147968 | 7 | 1 | 12 | |
| TCGA | CAPN12 | 147968 | 15 | 16 | 65 |
Total number of gains: 132; Total number of losses: 59; Total Number of normals: 297.
Somatic mutations of CAPN12:
Generating mutation plots.
Highly correlated genes for CAPN12:
Showing top 20/597 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CAPN12 | CHST1 | 0.858653 | 3 | 0 | 3 |
| CAPN12 | PDE7A | 0.798615 | 3 | 0 | 3 |
| CAPN12 | TNFRSF9 | 0.780877 | 3 | 0 | 3 |
| CAPN12 | GRIN2D | 0.779585 | 3 | 0 | 3 |
| CAPN12 | PTDSS1 | 0.772857 | 3 | 0 | 3 |
| CAPN12 | DARS2 | 0.760873 | 3 | 0 | 3 |
| CAPN12 | PLA2G7 | 0.750503 | 4 | 0 | 4 |
| CAPN12 | TANC2 | 0.747187 | 3 | 0 | 3 |
| CAPN12 | TTC13 | 0.744234 | 3 | 0 | 3 |
| CAPN12 | FADS3 | 0.741491 | 3 | 0 | 3 |
| CAPN12 | GXYLT2 | 0.739737 | 3 | 0 | 3 |
| CAPN12 | DNAH14 | 0.737651 | 3 | 0 | 3 |
| CAPN12 | CABYR | 0.737278 | 3 | 0 | 3 |
| CAPN12 | DENND3 | 0.736451 | 3 | 0 | 3 |
| CAPN12 | NVL | 0.73247 | 3 | 0 | 3 |
| CAPN12 | TMED8 | 0.73019 | 3 | 0 | 3 |
| CAPN12 | CDC42EP4 | 0.727414 | 4 | 0 | 4 |
| CAPN12 | RCBTB1 | 0.725778 | 3 | 0 | 3 |
| CAPN12 | HERC5 | 0.725586 | 3 | 0 | 3 |
| CAPN12 | HYOU1 | 0.724044 | 3 | 0 | 3 |
For details and further investigation, click here
