| Full name: RAB13, member RAS oncogene family | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 1q21.3 | ||
| Entrez ID: 5872 | HGNC ID: HGNC:9762 | Ensembl Gene: ENSG00000143545 | OMIM ID: 602672 |
| Drug and gene relationship at DGIdb | |||
Expression of RAB13:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RAB13 | 5872 | 202252_at | 0.2886 | 0.3760 | |
| GSE20347 | RAB13 | 5872 | 202252_at | 0.0179 | 0.8954 | |
| GSE23400 | RAB13 | 5872 | 202252_at | 0.2622 | 0.0000 | |
| GSE26886 | RAB13 | 5872 | 202252_at | 0.5908 | 0.0004 | |
| GSE29001 | RAB13 | 5872 | 202252_at | -0.1157 | 0.6435 | |
| GSE38129 | RAB13 | 5872 | 202252_at | 0.0642 | 0.5789 | |
| GSE45670 | RAB13 | 5872 | 202252_at | 0.0439 | 0.7747 | |
| GSE53622 | RAB13 | 5872 | 39713 | 0.0404 | 0.5308 | |
| GSE53624 | RAB13 | 5872 | 39713 | 0.0909 | 0.1674 | |
| GSE63941 | RAB13 | 5872 | 202252_at | -1.3965 | 0.2150 | |
| GSE77861 | RAB13 | 5872 | 202252_at | 0.1753 | 0.3480 | |
| GSE97050 | RAB13 | 5872 | A_23_P46369 | 0.0756 | 0.7700 | |
| SRP007169 | RAB13 | 5872 | RNAseq | -0.2648 | 0.5066 | |
| SRP008496 | RAB13 | 5872 | RNAseq | 0.3635 | 0.2927 | |
| SRP064894 | RAB13 | 5872 | RNAseq | 0.5265 | 0.0180 | |
| SRP133303 | RAB13 | 5872 | RNAseq | 0.0920 | 0.5546 | |
| SRP159526 | RAB13 | 5872 | RNAseq | 0.4225 | 0.0136 | |
| SRP193095 | RAB13 | 5872 | RNAseq | 0.0810 | 0.6432 | |
| SRP219564 | RAB13 | 5872 | RNAseq | -0.1402 | 0.6354 | |
| TCGA | RAB13 | 5872 | RNAseq | -0.0488 | 0.3036 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by RAB13 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of RAB13:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RAB13 | 5872 | 14 | 0 | 16 | |
| GSE20123 | RAB13 | 5872 | 14 | 0 | 16 | |
| GSE43470 | RAB13 | 5872 | 7 | 2 | 34 | |
| GSE46452 | RAB13 | 5872 | 2 | 1 | 56 | |
| GSE47630 | RAB13 | 5872 | 14 | 0 | 26 | |
| GSE54993 | RAB13 | 5872 | 0 | 4 | 66 | |
| GSE54994 | RAB13 | 5872 | 16 | 0 | 37 | |
| GSE60625 | RAB13 | 5872 | 0 | 0 | 11 | |
| GSE74703 | RAB13 | 5872 | 6 | 1 | 29 | |
| GSE74704 | RAB13 | 5872 | 7 | 0 | 13 | |
| TCGA | RAB13 | 5872 | 38 | 2 | 56 |
Total number of gains: 118; Total number of losses: 10; Total Number of normals: 360.
Somatic mutations of RAB13:
Generating mutation plots.
Highly correlated genes for RAB13:
Showing top 20/354 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RAB13 | PET117 | 0.808641 | 3 | 0 | 3 |
| RAB13 | MZT2B | 0.785919 | 3 | 0 | 3 |
| RAB13 | ISCA2 | 0.766815 | 3 | 0 | 3 |
| RAB13 | PILRA | 0.747476 | 3 | 0 | 3 |
| RAB13 | ROMO1 | 0.744921 | 3 | 0 | 3 |
| RAB13 | PSMC1 | 0.74234 | 4 | 0 | 4 |
| RAB13 | SLC45A4 | 0.737317 | 4 | 0 | 3 |
| RAB13 | DDX55 | 0.733718 | 3 | 0 | 3 |
| RAB13 | NIPBL | 0.73265 | 3 | 0 | 3 |
| RAB13 | MEA1 | 0.732488 | 3 | 0 | 3 |
| RAB13 | WDR75 | 0.730345 | 3 | 0 | 3 |
| RAB13 | NDUFV2 | 0.718493 | 3 | 0 | 3 |
| RAB13 | LIN52 | 0.715094 | 4 | 0 | 4 |
| RAB13 | PDZD11 | 0.709896 | 3 | 0 | 3 |
| RAB13 | IL6R | 0.709214 | 4 | 0 | 3 |
| RAB13 | YWHAG | 0.707385 | 3 | 0 | 3 |
| RAB13 | LPCAT1 | 0.707164 | 4 | 0 | 3 |
| RAB13 | LRP5L | 0.703354 | 3 | 0 | 3 |
| RAB13 | TYW5 | 0.702716 | 3 | 0 | 3 |
| RAB13 | PXMP4 | 0.701516 | 4 | 0 | 3 |
For details and further investigation, click here
