SLC45A4

 

Full name: solute carrier family 45 member 4 Alias Symbol: KIAA1126
Type: protein-coding gene Cytoband: 8q24.3
Entrez ID: 57210 HGNC ID: HGNC:29196 Ensembl Gene: ENSG00000022567 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of SLC45A4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SLC45A4 57210 225597_at 1.3852 0.0216
GSE26886 SLC45A4 57210 225597_at 1.3406 0.0001
GSE45670 SLC45A4 57210 225597_at 1.0277 0.0001
GSE53622 SLC45A4 57210 16472 0.9160 0.0000
GSE53624 SLC45A4 57210 16472 1.1669 0.0000
GSE63941 SLC45A4 57210 225597_at 0.0162 0.9774
GSE77861 SLC45A4 57210 225597_at 0.2843 0.1487
GSE97050 SLC45A4 A_21_P0005979 -0.1866 0.5382
SRP007169 SLC45A4 57210 RNAseq 1.8686 0.0054
SRP008496 SLC45A4 57210 RNAseq 1.3616 0.0065
SRP064894 SLC45A4 57210 RNAseq 0.7819 0.0021
SRP133303 SLC45A4 57210 RNAseq 0.5882 0.0023
SRP159526 SLC45A4 57210 RNAseq 0.8953 0.0000
SRP193095 SLC45A4 57210 RNAseq 0.2340 0.3617
TCGA SLC45A4 57210 RNAseq -0.2264 0.0062

Upregulated datasets: 6; Downregulated datasets: 0.  


 

Survival by SLC45A4 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SLC45A4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SLC45A4 57210 17 0 13
GSE20123 SLC45A4 57210 16 0 14
GSE43470 SLC45A4 57210 21 2 20
GSE46452 SLC45A4 57210 27 0 32
GSE47630 SLC45A4 57210 24 0 16
GSE54993 SLC45A4 57210 0 26 44
GSE54994 SLC45A4 57210 39 1 13
GSE60625 SLC45A4 57210 3 4 4
GSE74703 SLC45A4 57210 19 1 16
GSE74704 SLC45A4 57210 10 0 10
TCGA SLC45A4 57210 65 2 29

Total number of gains: 241; Total number of losses: 36; Total Number of normals: 211.  


 

Somatic mutations of SLC45A4:

 

Generating mutation plots.

 

Highly correlated genes for SLC45A4:

 

Showing top 20/1619 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SLC45A4FAM32A0.79745303
SLC45A4LGALS80.779991303
SLC45A4OTUD6B0.776286303
SLC45A4NCOA60.769348303
SLC45A4TFDP20.764985404
SLC45A4HELZ0.764802303
SLC45A4ATP6V1C10.757367606
SLC45A4U2SURP0.751523505
SLC45A4CHORDC10.748382303
SLC45A4EXOC60.742638303
SLC45A4GCSH0.74009404
SLC45A4RICTOR0.739535303
SLC45A4RAB130.737317403
SLC45A4DCUN1D20.736125303
SLC45A4TMEM970.735037606
SLC45A4FEZ20.734088303
SLC45A4CLCN70.733137404
SLC45A4PUF600.732695707
SLC45A4INTS80.732133505
SLC45A4PSMB60.732063303

For details and further investigation, click here