| Full name: ring finger protein 208 | Alias Symbol: DKFZP761H1710 | ||
| Type: protein-coding gene | Cytoband: 9q34.3 | ||
| Entrez ID: 727800 | HGNC ID: HGNC:25420 | Ensembl Gene: ENSG00000212864 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of RNF208:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RNF208 | 727800 | 221273_s_at | -0.4562 | 0.3783 | |
| GSE20347 | RNF208 | 727800 | 221273_s_at | -0.6448 | 0.0000 | |
| GSE23400 | RNF208 | 727800 | 221273_s_at | -0.4793 | 0.0000 | |
| GSE26886 | RNF208 | 727800 | 221273_s_at | -0.3054 | 0.0630 | |
| GSE29001 | RNF208 | 727800 | 221273_s_at | -0.4550 | 0.0076 | |
| GSE38129 | RNF208 | 727800 | 221273_s_at | -0.6558 | 0.0000 | |
| GSE45670 | RNF208 | 727800 | 221273_s_at | -0.0190 | 0.9045 | |
| GSE53622 | RNF208 | 727800 | 9642 | -1.6571 | 0.0000 | |
| GSE53624 | RNF208 | 727800 | 9642 | -1.5053 | 0.0000 | |
| GSE63941 | RNF208 | 727800 | 221273_s_at | 0.6838 | 0.0242 | |
| GSE77861 | RNF208 | 727800 | 221273_s_at | -0.4305 | 0.0659 | |
| GSE97050 | RNF208 | 727800 | A_33_P3379669 | -0.2874 | 0.2757 | |
| SRP064894 | RNF208 | 727800 | RNAseq | -1.3715 | 0.0013 | |
| SRP133303 | RNF208 | 727800 | RNAseq | -2.3902 | 0.0000 | |
| SRP159526 | RNF208 | 727800 | RNAseq | -0.8469 | 0.0752 | |
| SRP219564 | RNF208 | 727800 | RNAseq | -1.3827 | 0.0406 | |
| TCGA | RNF208 | 727800 | RNAseq | -0.2673 | 0.1287 |
Upregulated datasets: 0; Downregulated datasets: 5.
Survival by RNF208 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of RNF208:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RNF208 | 727800 | 5 | 7 | 18 | |
| GSE20123 | RNF208 | 727800 | 5 | 7 | 18 | |
| GSE43470 | RNF208 | 727800 | 3 | 7 | 33 | |
| GSE46452 | RNF208 | 727800 | 6 | 13 | 40 | |
| GSE47630 | RNF208 | 727800 | 6 | 15 | 19 | |
| GSE54993 | RNF208 | 727800 | 3 | 3 | 64 | |
| GSE54994 | RNF208 | 727800 | 12 | 8 | 33 | |
| GSE60625 | RNF208 | 727800 | 0 | 0 | 11 | |
| GSE74703 | RNF208 | 727800 | 3 | 5 | 28 | |
| GSE74704 | RNF208 | 727800 | 3 | 5 | 12 | |
| TCGA | RNF208 | 727800 | 29 | 23 | 44 |
Total number of gains: 75; Total number of losses: 93; Total Number of normals: 320.
Somatic mutations of RNF208:
Generating mutation plots.
Highly correlated genes for RNF208:
Showing top 20/1477 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RNF208 | DDI2 | 0.757207 | 3 | 0 | 3 |
| RNF208 | IL34 | 0.744948 | 5 | 0 | 5 |
| RNF208 | MOV10L1 | 0.74441 | 3 | 0 | 3 |
| RNF208 | TOM1 | 0.739276 | 10 | 0 | 10 |
| RNF208 | CASC3 | 0.739072 | 3 | 0 | 3 |
| RNF208 | LINC00320 | 0.730694 | 4 | 0 | 3 |
| RNF208 | PPDPF | 0.726075 | 10 | 0 | 9 |
| RNF208 | YPEL3 | 0.725942 | 6 | 0 | 5 |
| RNF208 | L1CAM | 0.722396 | 3 | 0 | 3 |
| RNF208 | SLCO4A1-AS1 | 0.721333 | 3 | 0 | 3 |
| RNF208 | NTNG1 | 0.720774 | 3 | 0 | 3 |
| RNF208 | PFKFB2 | 0.71979 | 6 | 0 | 6 |
| RNF208 | PLEKHG6 | 0.719653 | 11 | 0 | 9 |
| RNF208 | TRIP10 | 0.718931 | 11 | 0 | 10 |
| RNF208 | FCRLA | 0.718447 | 3 | 0 | 3 |
| RNF208 | ARHGEF10L | 0.718194 | 9 | 0 | 9 |
| RNF208 | NUAK2 | 0.717311 | 3 | 0 | 3 |
| RNF208 | PLCD1 | 0.716243 | 10 | 0 | 10 |
| RNF208 | CDKN2AIP | 0.714211 | 8 | 0 | 7 |
| RNF208 | EPGN | 0.71338 | 3 | 0 | 3 |
For details and further investigation, click here
