| Full name: long intergenic non-protein coding RNA 320 | Alias Symbol: PRED14|FLJ37539 | ||
| Type: non-coding RNA | Cytoband: 21q21.1 | ||
| Entrez ID: 387486 | HGNC ID: HGNC:19690 | Ensembl Gene: ENSG00000224924 | OMIM ID: |
Expression of LINC00320:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC00320 | 387486 | 1564392_at | -0.1152 | 0.6149 | |
| GSE26886 | LINC00320 | 387486 | 1564392_at | -0.2127 | 0.0173 | |
| GSE45670 | LINC00320 | 387486 | 1557481_a_at | -0.0074 | 0.9402 | |
| GSE53622 | LINC00320 | 387486 | 20452 | -2.6021 | 0.0000 | |
| GSE53624 | LINC00320 | 387486 | 20452 | -2.6173 | 0.0000 | |
| GSE63941 | LINC00320 | 387486 | 1564392_at | -0.0037 | 0.9857 | |
| GSE77861 | LINC00320 | 387486 | 1564392_at | -0.0573 | 0.5342 | |
| SRP133303 | LINC00320 | 387486 | RNAseq | 0.2449 | 0.1764 | |
| SRP219564 | LINC00320 | 387486 | RNAseq | 0.2976 | 0.5409 |
Upregulated datasets: 0; Downregulated datasets: 2.
Survival by LINC00320 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC00320:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC00320 | 387486 | 0 | 13 | 17 | |
| GSE20123 | LINC00320 | 387486 | 0 | 13 | 17 | |
| GSE43470 | LINC00320 | 387486 | 1 | 11 | 31 | |
| GSE46452 | LINC00320 | 387486 | 1 | 21 | 37 | |
| GSE47630 | LINC00320 | 387486 | 6 | 17 | 17 | |
| GSE54993 | LINC00320 | 387486 | 9 | 2 | 59 | |
| GSE54994 | LINC00320 | 387486 | 3 | 10 | 40 | |
| GSE60625 | LINC00320 | 387486 | 0 | 0 | 11 | |
| GSE74703 | LINC00320 | 387486 | 1 | 8 | 27 | |
| GSE74704 | LINC00320 | 387486 | 0 | 9 | 11 | |
| TCGA | LINC00320 | 387486 | 8 | 40 | 48 |
Total number of gains: 29; Total number of losses: 144; Total Number of normals: 315.
Somatic mutations of LINC00320:
Generating mutation plots.
Highly correlated genes for LINC00320:
Showing top 20/483 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC00320 | SFTPB | 0.839252 | 3 | 0 | 3 |
| LINC00320 | LYNX1 | 0.78758 | 3 | 0 | 3 |
| LINC00320 | UPK2 | 0.77734 | 4 | 0 | 4 |
| LINC00320 | TACR1 | 0.772289 | 3 | 0 | 3 |
| LINC00320 | CRISP2 | 0.768277 | 3 | 0 | 3 |
| LINC00320 | SPRR3 | 0.762734 | 3 | 0 | 3 |
| LINC00320 | ERBB3 | 0.759078 | 3 | 0 | 3 |
| LINC00320 | TECPR1 | 0.757356 | 3 | 0 | 3 |
| LINC00320 | TMPRSS11E | 0.756317 | 3 | 0 | 3 |
| LINC00320 | CHP1 | 0.748686 | 3 | 0 | 3 |
| LINC00320 | RHCG | 0.748385 | 3 | 0 | 3 |
| LINC00320 | PPDPF | 0.746795 | 3 | 0 | 3 |
| LINC00320 | ARHGEF10L | 0.742992 | 3 | 0 | 3 |
| LINC00320 | KLK13 | 0.739956 | 3 | 0 | 3 |
| LINC00320 | LINC00567 | 0.732332 | 3 | 0 | 3 |
| LINC00320 | RNF208 | 0.730694 | 4 | 0 | 3 |
| LINC00320 | ANKRD18B | 0.726413 | 3 | 0 | 3 |
| LINC00320 | GGT6 | 0.725768 | 3 | 0 | 3 |
| LINC00320 | SH3GLB2 | 0.72211 | 3 | 0 | 3 |
| LINC00320 | FMO2 | 0.721895 | 3 | 0 | 3 |
For details and further investigation, click here
