| Full name: RPARP antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 10q24.32 | ||
| Entrez ID: 100505761 | HGNC ID: HGNC:45238 | Ensembl Gene: ENSG00000269609 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of RPARP-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RPARP-AS1 | 100505761 | 214857_at | 0.4209 | 0.4855 | |
| GSE20347 | RPARP-AS1 | 100505761 | 214857_at | 0.1270 | 0.3845 | |
| GSE23400 | RPARP-AS1 | 100505761 | 214857_at | 0.1524 | 0.0007 | |
| GSE26886 | RPARP-AS1 | 100505761 | 214857_at | 0.4559 | 0.0045 | |
| GSE29001 | RPARP-AS1 | 100505761 | 214857_at | 0.4041 | 0.2216 | |
| GSE38129 | RPARP-AS1 | 100505761 | 214857_at | 0.2518 | 0.0741 | |
| GSE45670 | RPARP-AS1 | 100505761 | 214857_at | 0.2274 | 0.3360 | |
| GSE53622 | RPARP-AS1 | 100505761 | 51641 | 0.0175 | 0.8039 | |
| GSE53624 | RPARP-AS1 | 100505761 | 51641 | 0.1331 | 0.0578 | |
| GSE63941 | RPARP-AS1 | 100505761 | 214857_at | 1.6643 | 0.0098 | |
| GSE77861 | RPARP-AS1 | 100505761 | 214857_at | 0.0680 | 0.5841 | |
| SRP064894 | RPARP-AS1 | 100505761 | RNAseq | 0.0299 | 0.9166 | |
| SRP133303 | RPARP-AS1 | 100505761 | RNAseq | -0.1036 | 0.5961 | |
| SRP159526 | RPARP-AS1 | 100505761 | RNAseq | 0.1827 | 0.4724 | |
| SRP193095 | RPARP-AS1 | 100505761 | RNAseq | -0.0119 | 0.9073 | |
| SRP219564 | RPARP-AS1 | 100505761 | RNAseq | 0.5817 | 0.3845 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by RPARP-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of RPARP-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RPARP-AS1 | 100505761 | 2 | 9 | 19 | |
| GSE20123 | RPARP-AS1 | 100505761 | 2 | 8 | 20 | |
| GSE43470 | RPARP-AS1 | 100505761 | 0 | 8 | 35 | |
| GSE46452 | RPARP-AS1 | 100505761 | 0 | 11 | 48 | |
| GSE47630 | RPARP-AS1 | 100505761 | 2 | 14 | 24 | |
| GSE54993 | RPARP-AS1 | 100505761 | 8 | 0 | 62 | |
| GSE54994 | RPARP-AS1 | 100505761 | 1 | 11 | 41 | |
| GSE60625 | RPARP-AS1 | 100505761 | 0 | 0 | 11 | |
| GSE74703 | RPARP-AS1 | 100505761 | 0 | 5 | 31 | |
| GSE74704 | RPARP-AS1 | 100505761 | 1 | 4 | 15 |
Total number of gains: 16; Total number of losses: 70; Total Number of normals: 306.
Somatic mutations of RPARP-AS1:
Generating mutation plots.
Highly correlated genes for RPARP-AS1:
Showing top 20/214 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RPARP-AS1 | GTPBP6 | 0.683388 | 4 | 0 | 4 |
| RPARP-AS1 | DHRSX | 0.667612 | 3 | 0 | 3 |
| RPARP-AS1 | FLVCR1 | 0.648472 | 4 | 0 | 3 |
| RPARP-AS1 | APOBEC3G | 0.642515 | 3 | 0 | 3 |
| RPARP-AS1 | TMTC4 | 0.635023 | 3 | 0 | 3 |
| RPARP-AS1 | SLC44A5 | 0.632837 | 3 | 0 | 3 |
| RPARP-AS1 | SORL1 | 0.63277 | 3 | 0 | 3 |
| RPARP-AS1 | FAM24B | 0.631691 | 3 | 0 | 3 |
| RPARP-AS1 | POLR3A | 0.628277 | 3 | 0 | 3 |
| RPARP-AS1 | PRKCSH | 0.62735 | 4 | 0 | 3 |
| RPARP-AS1 | BRICD5 | 0.624307 | 3 | 0 | 3 |
| RPARP-AS1 | TSEN54 | 0.61904 | 4 | 0 | 4 |
| RPARP-AS1 | PTPN18 | 0.618712 | 3 | 0 | 3 |
| RPARP-AS1 | PXYLP1 | 0.616653 | 4 | 0 | 3 |
| RPARP-AS1 | SNHG19 | 0.615745 | 4 | 0 | 3 |
| RPARP-AS1 | FUT8 | 0.615711 | 3 | 0 | 3 |
| RPARP-AS1 | ELK4 | 0.6126 | 3 | 0 | 3 |
| RPARP-AS1 | LIFR | 0.612229 | 3 | 0 | 3 |
| RPARP-AS1 | CUEDC2 | 0.612212 | 6 | 0 | 4 |
| RPARP-AS1 | ETV6 | 0.610783 | 4 | 0 | 3 |
For details and further investigation, click here
