| Full name: SFT2 domain containing 3 | Alias Symbol: MGC5391 | ||
| Type: protein-coding gene | Cytoband: 2q14.3 | ||
| Entrez ID: 84826 | HGNC ID: HGNC:28767 | Ensembl Gene: ENSG00000173349 | OMIM ID: |
Expression of SFT2D3:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SFT2D3 | 84826 | 226639_at | 0.2768 | 0.6264 | |
| GSE26886 | SFT2D3 | 84826 | 226639_at | 0.6214 | 0.0014 | |
| GSE45670 | SFT2D3 | 84826 | 226639_at | 0.1367 | 0.4767 | |
| GSE63941 | SFT2D3 | 84826 | 226639_at | 0.2144 | 0.6551 | |
| GSE77861 | SFT2D3 | 84826 | 226639_at | 0.3169 | 0.1108 | |
| GSE97050 | SFT2D3 | 84826 | A_23_P5568 | -0.1338 | 0.5436 | |
| TCGA | SFT2D3 | 84826 | RNAseq | 0.0805 | 0.2050 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by SFT2D3 expression:
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| TCGA |
Note: Click image to view full size file.
Copy number change of SFT2D3:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SFT2D3 | 84826 | 6 | 3 | 21 | |
| GSE20123 | SFT2D3 | 84826 | 6 | 3 | 21 | |
| GSE43470 | SFT2D3 | 84826 | 2 | 1 | 40 | |
| GSE46452 | SFT2D3 | 84826 | 1 | 3 | 55 | |
| GSE47630 | SFT2D3 | 84826 | 6 | 0 | 34 | |
| GSE54993 | SFT2D3 | 84826 | 0 | 6 | 64 | |
| GSE54994 | SFT2D3 | 84826 | 11 | 0 | 42 | |
| GSE60625 | SFT2D3 | 84826 | 0 | 3 | 8 | |
| GSE74703 | SFT2D3 | 84826 | 2 | 1 | 33 | |
| GSE74704 | SFT2D3 | 84826 | 3 | 1 | 16 | |
| TCGA | SFT2D3 | 84826 | 22 | 8 | 66 |
Total number of gains: 59; Total number of losses: 29; Total Number of normals: 400.
Somatic mutations of SFT2D3:
Generating mutation plots.
Highly correlated genes for SFT2D3:
Showing top 20/812 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SFT2D3 | TEX261 | 0.864867 | 3 | 0 | 3 |
| SFT2D3 | LRRCC1 | 0.84351 | 3 | 0 | 3 |
| SFT2D3 | RFX7 | 0.831875 | 3 | 0 | 3 |
| SFT2D3 | ABCF2 | 0.824408 | 3 | 0 | 3 |
| SFT2D3 | RNF26 | 0.821155 | 3 | 0 | 3 |
| SFT2D3 | ZC3H12C | 0.806012 | 3 | 0 | 3 |
| SFT2D3 | UXS1 | 0.80159 | 3 | 0 | 3 |
| SFT2D3 | PALB2 | 0.790115 | 3 | 0 | 3 |
| SFT2D3 | GOPC | 0.784604 | 3 | 0 | 3 |
| SFT2D3 | SOX5 | 0.780823 | 3 | 0 | 3 |
| SFT2D3 | KLHL7 | 0.779642 | 3 | 0 | 3 |
| SFT2D3 | ASB7 | 0.776225 | 4 | 0 | 4 |
| SFT2D3 | PRELID2 | 0.76806 | 3 | 0 | 3 |
| SFT2D3 | SLC30A6 | 0.765558 | 4 | 0 | 4 |
| SFT2D3 | OGDH | 0.760885 | 3 | 0 | 3 |
| SFT2D3 | HMG20A | 0.759529 | 4 | 0 | 4 |
| SFT2D3 | EIF5A2 | 0.755249 | 3 | 0 | 3 |
| SFT2D3 | PATZ1 | 0.754836 | 3 | 0 | 3 |
| SFT2D3 | TAS2R19 | 0.754658 | 3 | 0 | 3 |
| SFT2D3 | ACBD6 | 0.754433 | 3 | 0 | 3 |
For details and further investigation, click here
