| Full name: high mobility group 20A | Alias Symbol: HMGX1|FLJ10739|HMGXB1 | ||
| Type: protein-coding gene | Cytoband: 15q24.3 | ||
| Entrez ID: 10363 | HGNC ID: HGNC:5001 | Ensembl Gene: ENSG00000140382 | OMIM ID: 605534 |
| Drug and gene relationship at DGIdb | |||
Expression of HMG20A:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | HMG20A | 10363 | 218152_at | 0.0797 | 0.8227 | |
| GSE20347 | HMG20A | 10363 | 218152_at | 0.3647 | 0.0405 | |
| GSE23400 | HMG20A | 10363 | 218152_at | 0.3049 | 0.0000 | |
| GSE26886 | HMG20A | 10363 | 218152_at | 0.1407 | 0.5188 | |
| GSE29001 | HMG20A | 10363 | 218152_at | 0.4629 | 0.0897 | |
| GSE38129 | HMG20A | 10363 | 218152_at | 0.2900 | 0.0419 | |
| GSE45670 | HMG20A | 10363 | 218152_at | -0.0072 | 0.9621 | |
| GSE53622 | HMG20A | 10363 | 4522 | 0.3412 | 0.0000 | |
| GSE53624 | HMG20A | 10363 | 4522 | 0.3383 | 0.0000 | |
| GSE63941 | HMG20A | 10363 | 218152_at | 0.2246 | 0.5146 | |
| GSE77861 | HMG20A | 10363 | 218152_at | 0.2176 | 0.3188 | |
| GSE97050 | HMG20A | 10363 | A_23_P436117 | -0.0243 | 0.9141 | |
| SRP007169 | HMG20A | 10363 | RNAseq | -0.2736 | 0.4476 | |
| SRP008496 | HMG20A | 10363 | RNAseq | -0.0726 | 0.7873 | |
| SRP064894 | HMG20A | 10363 | RNAseq | 0.1647 | 0.2468 | |
| SRP133303 | HMG20A | 10363 | RNAseq | 0.0564 | 0.5889 | |
| SRP159526 | HMG20A | 10363 | RNAseq | 0.2797 | 0.0704 | |
| SRP193095 | HMG20A | 10363 | RNAseq | 0.0538 | 0.5190 | |
| SRP219564 | HMG20A | 10363 | RNAseq | 0.2172 | 0.4762 | |
| TCGA | HMG20A | 10363 | RNAseq | -0.0421 | 0.4066 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by HMG20A expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of HMG20A:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | HMG20A | 10363 | 8 | 1 | 21 | |
| GSE20123 | HMG20A | 10363 | 8 | 1 | 21 | |
| GSE43470 | HMG20A | 10363 | 4 | 5 | 34 | |
| GSE46452 | HMG20A | 10363 | 3 | 7 | 49 | |
| GSE47630 | HMG20A | 10363 | 8 | 10 | 22 | |
| GSE54993 | HMG20A | 10363 | 5 | 6 | 59 | |
| GSE54994 | HMG20A | 10363 | 5 | 6 | 42 | |
| GSE60625 | HMG20A | 10363 | 4 | 0 | 7 | |
| GSE74703 | HMG20A | 10363 | 4 | 3 | 29 | |
| GSE74704 | HMG20A | 10363 | 5 | 1 | 14 | |
| TCGA | HMG20A | 10363 | 14 | 16 | 66 |
Total number of gains: 68; Total number of losses: 56; Total Number of normals: 364.
Somatic mutations of HMG20A:
Generating mutation plots.
Highly correlated genes for HMG20A:
Showing top 20/848 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| HMG20A | HAX1 | 0.800574 | 3 | 0 | 3 |
| HMG20A | TBC1D8B | 0.781849 | 3 | 0 | 3 |
| HMG20A | STEAP1 | 0.780774 | 3 | 0 | 3 |
| HMG20A | ANKS6 | 0.776322 | 3 | 0 | 3 |
| HMG20A | LMBR1 | 0.774408 | 3 | 0 | 3 |
| HMG20A | TUFM | 0.764628 | 3 | 0 | 3 |
| HMG20A | MRPL37 | 0.763793 | 3 | 0 | 3 |
| HMG20A | SFT2D3 | 0.759529 | 4 | 0 | 4 |
| HMG20A | RNF26 | 0.751332 | 3 | 0 | 3 |
| HMG20A | CRLS1 | 0.742394 | 3 | 0 | 3 |
| HMG20A | SNX19 | 0.737167 | 3 | 0 | 3 |
| HMG20A | GCLC | 0.734813 | 3 | 0 | 3 |
| HMG20A | MRPL44 | 0.733452 | 3 | 0 | 3 |
| HMG20A | EFCAB7 | 0.722327 | 3 | 0 | 3 |
| HMG20A | GGPS1 | 0.720625 | 3 | 0 | 3 |
| HMG20A | MAPK10 | 0.71916 | 3 | 0 | 3 |
| HMG20A | CDC42EP3 | 0.707185 | 3 | 0 | 3 |
| HMG20A | LMBRD2 | 0.705821 | 3 | 0 | 3 |
| HMG20A | CNOT10 | 0.700783 | 3 | 0 | 3 |
| HMG20A | WDR20 | 0.700698 | 3 | 0 | 3 |
For details and further investigation, click here
