| Full name: ATP binding cassette subfamily F member 2 | Alias Symbol: EST133090|ABC28|M-ABC1|HUSSY-18 | ||
| Type: protein-coding gene | Cytoband: 7q36.1 | ||
| Entrez ID: 10061 | HGNC ID: HGNC:71 | Ensembl Gene: ENSG00000033050 | OMIM ID: 612510 |
| Drug and gene relationship at DGIdb | |||
Expression of ABCF2:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | ABCF2 | 10061 | 209247_s_at | 0.6014 | 0.2878 | |
| GSE20347 | ABCF2 | 10061 | 209247_s_at | 0.4788 | 0.0008 | |
| GSE23400 | ABCF2 | 10061 | 209247_s_at | 0.5117 | 0.0000 | |
| GSE26886 | ABCF2 | 10061 | 209247_s_at | 0.0682 | 0.7601 | |
| GSE29001 | ABCF2 | 10061 | 209247_s_at | 0.4948 | 0.0140 | |
| GSE38129 | ABCF2 | 10061 | 209247_s_at | 0.5574 | 0.0000 | |
| GSE45670 | ABCF2 | 10061 | 209247_s_at | 0.5833 | 0.0002 | |
| GSE53622 | ABCF2 | 10061 | 48849 | 0.6382 | 0.0000 | |
| GSE53624 | ABCF2 | 10061 | 48849 | 0.5651 | 0.0000 | |
| GSE63941 | ABCF2 | 10061 | 209247_s_at | 0.5531 | 0.1132 | |
| GSE77861 | ABCF2 | 10061 | 209247_s_at | 0.5240 | 0.0472 | |
| GSE97050 | ABCF2 | 10061 | A_23_P215175 | 0.3005 | 0.2472 | |
| SRP007169 | ABCF2 | 10061 | RNAseq | 1.3992 | 0.0063 | |
| SRP008496 | ABCF2 | 10061 | RNAseq | 0.6107 | 0.0552 | |
| SRP064894 | ABCF2 | 10061 | RNAseq | 0.7845 | 0.0003 | |
| SRP133303 | ABCF2 | 10061 | RNAseq | 0.4640 | 0.0015 | |
| SRP159526 | ABCF2 | 10061 | RNAseq | 0.4833 | 0.0346 | |
| SRP193095 | ABCF2 | 10061 | RNAseq | 0.4728 | 0.0000 | |
| SRP219564 | ABCF2 | 10061 | RNAseq | 0.3753 | 0.2626 | |
| TCGA | ABCF2 | 10061 | RNAseq | 0.1432 | 0.0048 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by ABCF2 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of ABCF2:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | ABCF2 | 10061 | 2 | 4 | 24 | |
| GSE20123 | ABCF2 | 10061 | 2 | 4 | 24 | |
| GSE43470 | ABCF2 | 10061 | 2 | 5 | 36 | |
| GSE46452 | ABCF2 | 10061 | 7 | 2 | 50 | |
| GSE47630 | ABCF2 | 10061 | 5 | 9 | 26 | |
| GSE54993 | ABCF2 | 10061 | 3 | 3 | 64 | |
| GSE54994 | ABCF2 | 10061 | 5 | 8 | 40 | |
| GSE60625 | ABCF2 | 10061 | 0 | 0 | 11 | |
| GSE74703 | ABCF2 | 10061 | 2 | 4 | 30 | |
| GSE74704 | ABCF2 | 10061 | 1 | 4 | 15 | |
| TCGA | ABCF2 | 10061 | 28 | 25 | 43 |
Total number of gains: 57; Total number of losses: 68; Total Number of normals: 363.
Somatic mutations of ABCF2:
Generating mutation plots.
Highly correlated genes for ABCF2:
Showing top 20/1543 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| ABCF2 | SPNS1 | 0.845299 | 4 | 0 | 4 |
| ABCF2 | SFT2D3 | 0.824408 | 3 | 0 | 3 |
| ABCF2 | RAD18 | 0.783182 | 3 | 0 | 3 |
| ABCF2 | FAM171B | 0.779222 | 3 | 0 | 3 |
| ABCF2 | C1orf122 | 0.775578 | 3 | 0 | 3 |
| ABCF2 | SPRED2 | 0.765824 | 3 | 0 | 3 |
| ABCF2 | PDPR | 0.763313 | 3 | 0 | 3 |
| ABCF2 | NPRL3 | 0.760867 | 4 | 0 | 4 |
| ABCF2 | PSPC1 | 0.75022 | 4 | 0 | 4 |
| ABCF2 | TRAF7 | 0.740953 | 5 | 0 | 5 |
| ABCF2 | GTF2H3 | 0.725787 | 3 | 0 | 3 |
| ABCF2 | ALG10 | 0.724931 | 5 | 0 | 4 |
| ABCF2 | NOP56 | 0.719984 | 3 | 0 | 3 |
| ABCF2 | CDT1 | 0.719817 | 10 | 0 | 10 |
| ABCF2 | PYCR2 | 0.718618 | 3 | 0 | 3 |
| ABCF2 | NCAPG2 | 0.717559 | 11 | 0 | 11 |
| ABCF2 | ANKRD54 | 0.712936 | 3 | 0 | 3 |
| ABCF2 | FAM89A | 0.712466 | 3 | 0 | 3 |
| ABCF2 | PTPMT1 | 0.71128 | 4 | 0 | 3 |
| ABCF2 | TRPM4 | 0.709932 | 4 | 0 | 3 |
For details and further investigation, click here
