RAD23A

 

Full name: RAD23 homolog A, nucleotide excision repair protein Alias Symbol: HHR23A|MGC111083
Type: protein-coding gene Cytoband: 19p13.13
Entrez ID: 5886 HGNC ID: HGNC:9812 Ensembl Gene: ENSG00000179262 OMIM ID: 600061
Drug and gene relationship at DGIdb

 

Expression of RAD23A:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 RAD23A 5886 201046_s_at 0.5132 0.3662
GSE20347 RAD23A 5886 201046_s_at 0.4698 0.0020
GSE23400 RAD23A 5886 201046_s_at 0.4949 0.0000
GSE26886 RAD23A 5886 201046_s_at 1.3073 0.0000
GSE29001 RAD23A 5886 201046_s_at 0.6072 0.0537
GSE38129 RAD23A 5886 201046_s_at 0.4123 0.0009
GSE45670 RAD23A 5886 201046_s_at 0.3746 0.0053
GSE63941 RAD23A 5886 201046_s_at 1.0194 0.0040
GSE77861 RAD23A 5886 201046_s_at 0.9273 0.0003
GSE97050 RAD23A 5886 A_33_P3362193 -0.0757 0.7174
SRP007169 RAD23A 5886 RNAseq 2.2893 0.0003
SRP008496 RAD23A 5886 RNAseq 2.1066 0.0001
SRP064894 RAD23A 5886 RNAseq 0.8820 0.0006
SRP133303 RAD23A 5886 RNAseq 0.5216 0.0023
SRP159526 RAD23A 5886 RNAseq 0.5141 0.0339
SRP193095 RAD23A 5886 RNAseq 0.6380 0.0000
SRP219564 RAD23A 5886 RNAseq 0.7095 0.0977
TCGA RAD23A 5886 RNAseq 0.1509 0.0006

Upregulated datasets: 4; Downregulated datasets: 0.  


 

Survival by RAD23A expression:

 

TCGA

 

Note: Click image to view full size file.  


Copy number change of RAD23A:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 RAD23A 5886 4 2 24
GSE20123 RAD23A 5886 3 1 26
GSE43470 RAD23A 5886 2 6 35
GSE46452 RAD23A 5886 47 1 11
GSE47630 RAD23A 5886 4 7 29
GSE54993 RAD23A 5886 16 3 51
GSE54994 RAD23A 5886 8 13 32
GSE60625 RAD23A 5886 9 0 2
GSE74703 RAD23A 5886 2 4 30
GSE74704 RAD23A 5886 0 1 19
TCGA RAD23A 5886 17 12 67

Total number of gains: 112; Total number of losses: 50; Total Number of normals: 326.  


 

Somatic mutations of RAD23A:

 

Generating mutation plots.

 

Highly correlated genes for RAD23A:

 

Showing top 20/1765 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
RAD23AIRS20.838236303
RAD23AZBED10.832205303
RAD23AMAP1B0.820778303
RAD23ATMTC10.817371303
RAD23AKLHL130.80088404
RAD23ATP53I130.796021404
RAD23AZNF3170.792074505
RAD23AWIZ0.78073909
RAD23ASLC39A30.780156404
RAD23ABRI30.776046404
RAD23AWDR810.775192403
RAD23ARAVER10.774372707
RAD23ANMT10.773831505
RAD23AWDR660.77302303
RAD23ATNRC180.769915505
RAD23AACBD60.769545404
RAD23ASGCE0.767457303
RAD23AXPR10.765691404
RAD23AZNF8050.765281303
RAD23APRTFDC10.763828303

For details and further investigation, click here