SIRT4

 

Full name: sirtuin 4 Alias Symbol: SIR2L4
Type: protein-coding gene Cytoband: 12q24.31
Entrez ID: 23409 HGNC ID: HGNC:14932 Ensembl Gene: ENSG00000089163 OMIM ID: 604482
Drug and gene relationship at DGIdb

 

Expression of SIRT4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SIRT4 23409 222248_s_at -0.0614 0.8708
GSE20347 SIRT4 23409 222248_s_at 0.0594 0.4617
GSE23400 SIRT4 23409 222248_s_at -0.0612 0.0367
GSE26886 SIRT4 23409 220047_at 0.7172 0.0510
GSE29001 SIRT4 23409 222248_s_at -0.0506 0.7565
GSE38129 SIRT4 23409 222248_s_at -0.0879 0.3515
GSE45670 SIRT4 23409 220047_at -0.1980 0.1323
GSE53622 SIRT4 23409 105961 -0.1210 0.4493
GSE53624 SIRT4 23409 105961 -0.0497 0.7293
GSE63941 SIRT4 23409 222248_s_at 0.3446 0.5151
GSE77861 SIRT4 23409 220047_at -0.0119 0.9325
SRP159526 SIRT4 23409 RNAseq 0.5280 0.4413
TCGA SIRT4 23409 RNAseq -0.6996 0.0231

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by SIRT4 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SIRT4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SIRT4 23409 6 2 22
GSE20123 SIRT4 23409 6 2 22
GSE43470 SIRT4 23409 2 2 39
GSE46452 SIRT4 23409 9 1 49
GSE47630 SIRT4 23409 9 3 28
GSE54993 SIRT4 23409 0 5 65
GSE54994 SIRT4 23409 7 6 40
GSE60625 SIRT4 23409 0 0 11
GSE74703 SIRT4 23409 2 1 33
GSE74704 SIRT4 23409 3 2 15
TCGA SIRT4 23409 21 10 65

Total number of gains: 65; Total number of losses: 34; Total Number of normals: 389.  


 

Somatic mutations of SIRT4:

 

Generating mutation plots.

 

Highly correlated genes for SIRT4:

 

Showing top 20/56 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SIRT4CUBN0.636496404
SIRT4C15orf650.630756303
SIRT4PCGF20.62222303
SIRT4ZMAT10.621761303
SIRT4ABL10.608029303
SIRT4PDX10.606443403
SIRT4ITPKB0.605558303
SIRT4PDE9A0.598666403
SIRT4ERN20.589862303
SIRT4AP2A20.588743403
SIRT4EPX0.588407303
SIRT4ART10.584203303
SIRT4STAT5B0.579329403
SIRT4FRZB0.578706404
SIRT4SHC20.571145403
SIRT4VSTM2L0.569951403
SIRT4FAM76A0.567878303
SIRT4GNAZ0.561643604
SIRT4SIGLEC90.560229503
SIRT4TMEM2040.559827303

For details and further investigation, click here