SLC10A7

 

Full name: solute carrier family 10 member 7 Alias Symbol: MGC25043|DKFZp566M114|DKFZp313H0531|DKFZp779O2438
Type: protein-coding gene Cytoband: 4q31.22
Entrez ID: 84068 HGNC ID: HGNC:23088 Ensembl Gene: ENSG00000120519 OMIM ID: 611459
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of SLC10A7:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SLC10A7 84068 235143_at -0.1643 0.7134
GSE26886 SLC10A7 84068 235143_at -0.9384 0.0001
GSE45670 SLC10A7 84068 235143_at 0.0119 0.9472
GSE53622 SLC10A7 84068 92404 -0.1952 0.0213
GSE53624 SLC10A7 84068 92404 -0.4239 0.0001
GSE63941 SLC10A7 84068 235143_at -0.3201 0.5381
GSE77861 SLC10A7 84068 235143_at -0.1363 0.3211
GSE97050 SLC10A7 84068 A_23_P213085 0.3794 0.2429
SRP007169 SLC10A7 84068 RNAseq -0.7031 0.1431
SRP008496 SLC10A7 84068 RNAseq -0.6913 0.0084
SRP064894 SLC10A7 84068 RNAseq -0.3062 0.1870
SRP133303 SLC10A7 84068 RNAseq 0.3630 0.0419
SRP159526 SLC10A7 84068 RNAseq -0.6072 0.0191
SRP193095 SLC10A7 84068 RNAseq -0.4399 0.0002
SRP219564 SLC10A7 84068 RNAseq -0.1994 0.6508
TCGA SLC10A7 84068 RNAseq -0.1688 0.0135

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by SLC10A7 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SLC10A7:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SLC10A7 84068 0 12 18
GSE20123 SLC10A7 84068 0 12 18
GSE43470 SLC10A7 84068 0 13 30
GSE46452 SLC10A7 84068 1 36 22
GSE47630 SLC10A7 84068 0 22 18
GSE54993 SLC10A7 84068 10 0 60
GSE54994 SLC10A7 84068 2 11 40
GSE60625 SLC10A7 84068 0 1 10
GSE74703 SLC10A7 84068 0 11 25
GSE74704 SLC10A7 84068 0 7 13
TCGA SLC10A7 84068 12 32 52

Total number of gains: 25; Total number of losses: 157; Total Number of normals: 306.  


 

Somatic mutations of SLC10A7:

 

Generating mutation plots.

 

Highly correlated genes for SLC10A7:

 

Showing top 20/780 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SLC10A7VPS530.781375303
SLC10A7PDIK1L0.779693303
SLC10A7GSTO20.777702303
SLC10A7MAP4K50.775027303
SLC10A7CHMP50.771245303
SLC10A7MON20.770524303
SLC10A7GAPVD10.765189303
SLC10A7MRPS270.762475303
SLC10A7DALRD30.761736303
SLC10A7B4GALT50.758271404
SLC10A7SNRNP350.757073303
SLC10A7THG1L0.755985303
SLC10A7TMEM167A0.75453303
SLC10A7OSBPL20.753943404
SLC10A7RCOR10.752857403
SLC10A7CCDC250.746259303
SLC10A7QRICH10.74346404
SLC10A7UNC5B0.739405303
SLC10A7KDM5B0.737861303
SLC10A7GLOD40.736754303

For details and further investigation, click here