SLC12A5

 

Full name: solute carrier family 12 member 5 Alias Symbol: KIAA1176|KCC2
Type: protein-coding gene Cytoband: 20q13.12
Entrez ID: 57468 HGNC ID: HGNC:13818 Ensembl Gene: ENSG00000124140 OMIM ID: 606726
Drug and gene relationship at DGIdb

 

Expression of SLC12A5:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SLC12A5 57468 210040_at 0.0415 0.8890
GSE20347 SLC12A5 57468 210040_at 0.1039 0.1584
GSE23400 SLC12A5 57468 210040_at -0.0277 0.5991
GSE26886 SLC12A5 57468 210040_at 0.0822 0.5375
GSE29001 SLC12A5 57468 210040_at -0.0599 0.7625
GSE38129 SLC12A5 57468 210040_at -0.0318 0.7225
GSE45670 SLC12A5 57468 210040_at 0.1309 0.1403
GSE53622 SLC12A5 57468 4631 -1.3260 0.0000
GSE53624 SLC12A5 57468 4631 -1.0329 0.0000
GSE63941 SLC12A5 57468 210040_at 0.1176 0.3554
GSE77861 SLC12A5 57468 210040_at 0.0749 0.5467
TCGA SLC12A5 57468 RNAseq -1.0354 0.0172

Upregulated datasets: 0; Downregulated datasets: 3.  


 

Survival by SLC12A5 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SLC12A5:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SLC12A5 57468 14 1 15
GSE20123 SLC12A5 57468 14 1 15
GSE43470 SLC12A5 57468 12 1 30
GSE46452 SLC12A5 57468 29 0 30
GSE47630 SLC12A5 57468 24 1 15
GSE54993 SLC12A5 57468 0 17 53
GSE54994 SLC12A5 57468 25 0 28
GSE60625 SLC12A5 57468 0 0 11
GSE74703 SLC12A5 57468 10 1 25
GSE74704 SLC12A5 57468 10 0 10
TCGA SLC12A5 57468 46 3 47

Total number of gains: 184; Total number of losses: 25; Total Number of normals: 279.  


 

Somatic mutations of SLC12A5:

 

Generating mutation plots.

 

Highly correlated genes for SLC12A5:

 

Showing top 20/301 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SLC12A5ZYX0.708675404
SLC12A5APOH0.684814303
SLC12A5MTTP0.680241303
SLC12A5SBNO20.672399303
SLC12A5ITIH20.669978605
SLC12A5CROCC0.662304303
SLC12A5LIN7A0.655806303
SLC12A5CYSLTR20.654713404
SLC12A5LINC004100.650471303
SLC12A5CD1B0.649783403
SLC12A5ALAS20.642131303
SLC12A5ACSBG20.640254505
SLC12A5DCLK10.638588303
SLC12A5NPB0.634531303
SLC12A5MC2R0.633451705
SLC12A5CCDC1550.631945504
SLC12A5SERPINA20.630022404
SLC12A5SLC6A130.629014605
SLC12A5HS1BP30.628167403
SLC12A5NR4A30.627513303

For details and further investigation, click here