ARMC9

 

Full name: armadillo repeat containing 9 Alias Symbol: FLJ12584|KIAA1868|ARM|KU-MEL-1
Type: protein-coding gene Cytoband: 2q37.1
Entrez ID: 80210 HGNC ID: HGNC:20730 Ensembl Gene: ENSG00000135931 OMIM ID: 617612
Drug and gene relationship at DGIdb

 

Expression of ARMC9:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE20347 ARMC9 80210 219637_at 0.1822 0.0476
GSE23400 ARMC9 80210 219637_at 0.0568 0.4407
GSE29001 ARMC9 80210 219636_s_at 0.1481 0.4757
GSE38129 ARMC9 80210 219636_s_at 0.0175 0.9478
GSE53622 ARMC9 80210 16271 0.9154 0.0000
GSE53624 ARMC9 80210 105075 1.4293 0.0000
GSE63941 ARMC9 80210 219637_at -2.2593 0.0098
GSE97050 ARMC9 80210 A_23_P209735 -0.1352 0.7959
SRP007169 ARMC9 80210 RNAseq 2.9519 0.0000
SRP008496 ARMC9 80210 RNAseq 3.3664 0.0000
SRP064894 ARMC9 80210 RNAseq 1.8758 0.0000
SRP133303 ARMC9 80210 RNAseq 1.0944 0.0001
SRP159526 ARMC9 80210 RNAseq 1.4819 0.0009
SRP193095 ARMC9 80210 RNAseq 0.7646 0.0000
SRP219564 ARMC9 80210 RNAseq -0.2975 0.7913
TCGA ARMC9 80210 RNAseq -0.0692 0.5566

Upregulated datasets: 6; Downregulated datasets: 1.  


 

Survival by ARMC9 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ARMC9:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ARMC9 80210 1 13 16
GSE20123 ARMC9 80210 1 12 17
GSE43470 ARMC9 80210 1 8 34
GSE46452 ARMC9 80210 0 5 54
GSE47630 ARMC9 80210 4 5 31
GSE54993 ARMC9 80210 2 2 66
GSE54994 ARMC9 80210 6 11 36
GSE60625 ARMC9 80210 0 3 8
GSE74703 ARMC9 80210 1 6 29
GSE74704 ARMC9 80210 1 5 14
TCGA ARMC9 80210 14 26 56

Total number of gains: 31; Total number of losses: 96; Total Number of normals: 361.  


 

Somatic mutations of ARMC9:

 

Generating mutation plots.

 

Highly correlated genes for ARMC9:

 

Showing top 20/894 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ARMC9SLC39A130.803239404
ARMC9SYNC0.780365505
ARMC9SYNE10.779434404
ARMC9CORO2B0.77046303
ARMC9NACC20.770342404
ARMC9ADARB10.762408404
ARMC9HSPB70.751788404
ARMC9RAB340.74848303
ARMC9TEAD20.747446303
ARMC9DMPK0.744762303
ARMC9TIMP30.741917505
ARMC9FRY0.741515404
ARMC9EFEMP20.738769807
ARMC9MOAP10.735883303
ARMC9ZNF8270.735186303
ARMC9TCEAL10.731242303
ARMC9WDR10.72561303
ARMC9FKBP70.724205404
ARMC9PTPDC10.722589303
ARMC9CAMK2G0.721894303

For details and further investigation, click here