| Full name: small nuclear ribonucleoprotein U5 subunit 200 | Alias Symbol: U5-200KD|HELIC2|KIAA0788|BRR2 | ||
| Type: protein-coding gene | Cytoband: 2q11.2 | ||
| Entrez ID: 23020 | HGNC ID: HGNC:30859 | Ensembl Gene: ENSG00000144028 | OMIM ID: 601664 |
| Drug and gene relationship at DGIdb | |||
Expression of SNRNP200:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SNRNP200 | 23020 | 232931_at | 0.2153 | 0.8049 | |
| GSE26886 | SNRNP200 | 23020 | 232931_at | -0.6869 | 0.0012 | |
| GSE45670 | SNRNP200 | 23020 | 232931_at | 0.2702 | 0.0628 | |
| GSE53622 | SNRNP200 | 23020 | 96340 | 0.4194 | 0.0000 | |
| GSE53624 | SNRNP200 | 23020 | 96340 | 0.5016 | 0.0000 | |
| GSE63941 | SNRNP200 | 23020 | 232931_at | 0.0445 | 0.9069 | |
| GSE77861 | SNRNP200 | 23020 | 232931_at | 0.0929 | 0.3809 | |
| GSE97050 | SNRNP200 | 23020 | A_23_P131626 | 0.0672 | 0.7529 | |
| SRP007169 | SNRNP200 | 23020 | RNAseq | 2.0861 | 0.0000 | |
| SRP008496 | SNRNP200 | 23020 | RNAseq | 1.9997 | 0.0000 | |
| SRP064894 | SNRNP200 | 23020 | RNAseq | 0.4386 | 0.0216 | |
| SRP133303 | SNRNP200 | 23020 | RNAseq | 0.3500 | 0.0017 | |
| SRP159526 | SNRNP200 | 23020 | RNAseq | 0.5413 | 0.0424 | |
| SRP193095 | SNRNP200 | 23020 | RNAseq | 0.3204 | 0.0001 | |
| SRP219564 | SNRNP200 | 23020 | RNAseq | 0.4198 | 0.2743 | |
| TCGA | SNRNP200 | 23020 | RNAseq | 0.0462 | 0.2385 |
Upregulated datasets: 2; Downregulated datasets: 0.
Survival by SNRNP200 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SNRNP200:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SNRNP200 | 23020 | 6 | 2 | 22 | |
| GSE20123 | SNRNP200 | 23020 | 6 | 2 | 22 | |
| GSE43470 | SNRNP200 | 23020 | 2 | 3 | 38 | |
| GSE46452 | SNRNP200 | 23020 | 2 | 3 | 54 | |
| GSE47630 | SNRNP200 | 23020 | 7 | 0 | 33 | |
| GSE54993 | SNRNP200 | 23020 | 0 | 6 | 64 | |
| GSE54994 | SNRNP200 | 23020 | 11 | 0 | 42 | |
| GSE60625 | SNRNP200 | 23020 | 0 | 3 | 8 | |
| GSE74703 | SNRNP200 | 23020 | 2 | 2 | 32 | |
| GSE74704 | SNRNP200 | 23020 | 4 | 1 | 15 | |
| TCGA | SNRNP200 | 23020 | 36 | 3 | 57 |
Total number of gains: 76; Total number of losses: 25; Total Number of normals: 387.
Somatic mutations of SNRNP200:
Generating mutation plots.
Highly correlated genes for SNRNP200:
Showing top 20/358 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SNRNP200 | UBXN2A | 0.83557 | 3 | 0 | 3 |
| SNRNP200 | KHNYN | 0.809294 | 3 | 0 | 3 |
| SNRNP200 | TBRG1 | 0.797253 | 3 | 0 | 3 |
| SNRNP200 | NEDD8 | 0.790418 | 3 | 0 | 3 |
| SNRNP200 | ANKHD1 | 0.773548 | 3 | 0 | 3 |
| SNRNP200 | METTL17 | 0.769544 | 3 | 0 | 3 |
| SNRNP200 | DDX59 | 0.764094 | 3 | 0 | 3 |
| SNRNP200 | SLC35E1 | 0.761007 | 3 | 0 | 3 |
| SNRNP200 | NKTR | 0.758257 | 3 | 0 | 3 |
| SNRNP200 | BRCA1 | 0.756783 | 3 | 0 | 3 |
| SNRNP200 | CBFA2T2 | 0.749542 | 3 | 0 | 3 |
| SNRNP200 | MZT1 | 0.748299 | 4 | 0 | 4 |
| SNRNP200 | CRK | 0.746338 | 3 | 0 | 3 |
| SNRNP200 | C6orf163 | 0.745477 | 3 | 0 | 3 |
| SNRNP200 | EPRS | 0.740715 | 3 | 0 | 3 |
| SNRNP200 | TMEM237 | 0.738504 | 3 | 0 | 3 |
| SNRNP200 | KIN | 0.737384 | 3 | 0 | 3 |
| SNRNP200 | STON2 | 0.735688 | 3 | 0 | 3 |
| SNRNP200 | TTC4 | 0.731023 | 3 | 0 | 3 |
| SNRNP200 | USP14 | 0.731021 | 3 | 0 | 3 |
For details and further investigation, click here
